Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0319 ATGCAAATGATTATTCCATCCTTTGAGTCGGTCGCTGGTCTTGGTTCTGCCACTCCTTACATTTCCAAGGCTCTCAAGTCGGTATCAAGACAATTCAGAAGCCTGGAAAATGCAATCTCCGATCAAGTTAAGCATATAAGAGAAATTTTGGGAGAGGAATTATCAGGAACTACTAGTGGTGGTGCTACTTCTTCCACCAGTGGCAAACATGACAGCAGCAATATAGCGCGATTGAAATTCTTAGACCAAAGCTTTCAAAAGAACAAATTCATCGCTGCGAGTAGTACCGGCTGCTATGTTGAACACCAACAGAACTCGTGGAGGCCGCAGCAGAAAGGCTTGCCAGAACGTGCGGTGTCTGTTCTTAGAGCTTGGTTGTTTGATCATTTTCTTCACCCGTACCCCACAGATGCTGATAAACACATGCTAGCTGCTCGAACAGGTCTATCTCGGAACCAGGTATCAAACTGGTTCATAAACGCCCGAGTTCGTGTATGGAAGCCAATGGTAGAGGAAATACACATGCTTGAAACAAAAGGAGGGTTGACGAGTGAGATAAACGTCCAGAACGCAGGTAAAAACGAGGGAACTTGTGCCTTGGAAGGTGGCCATGGCGAGTCAAGAGGAGATCAATTGCAGTGTGTGGAAAGCCATATGGATGAGGAACCCGTGGCGGAGGAGGAATTAAATGCACAACAACAATGGGATCAAGAGAAGAGATCCAAACTTGAATGTCACATGGAGGGCACATTAATGGGTTTTGTTCCTTACAGAAGGGCAGAAGTGGAGGCTGGGGCAGTTGGACCAGTGTCCCTAACGCTTGGTCTCAAACACGGCGACGTTGAAGCAATACAGCAACACCACCACCACCTTAGCCGCCACTTTGGAGGCCACGTCATCAACGATTTCGTTGGCTAA 918 0.4728 MQMIIPSFESVAGLGSATPYISKALKSVSRQFRSLENAISDQVKHIREILGEELSGTTSGGATSSTSGKHDSSNIARLKFLDQSFQKNKFIAASSTGCYVEHQQNSWRPQQKGLPERAVSVLRAWLFDHFLHPYPTDADKHMLAARTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGGLTSEINVQNAGKNEGTCALEGGHGESRGDQLQCVESHMDEEPVAEEELNAQQQWDQEKRSKLECHMEGTLMGFVPYRRAEVEAGAVGPVSLTLGLKHGDVEAIQQHHHHLSRHFGGHVINDFVG 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0319 305 CDD homeodomain 114 169 IPR001356 GO:0003677
Mibi07g0319 305 SUPERFAMILY Homeodomain-like 114 174 IPR009057 -
Mibi07g0319 305 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 196 - -
Mibi07g0319 305 FunFam BEL1-like homeodomain protein 9 111 173 - -
Mibi07g0319 305 Pfam Homeobox KN domain 125 164 IPR008422 GO:0003677|GO:0006355
Mibi07g0319 305 Pfam Associated with HOX 1 40 IPR006563 -
Mibi07g0319 305 Gene3D - 111 173 - -
Mibi07g0319 305 SMART HOX_1 106 172 IPR001356 GO:0003677
Mibi07g0319 305 ProSiteProfiles 'Homeobox' domain profile. 105 168 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0319 Mibi-ChrMibi07 4024272 4026002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0319 1 178 Homeobox Transcription Factor Family AT5G02030 52.778 6.03e-54 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mibi07g0319 POX 7.7e-11 No_clan