Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0311 ATGTCGGCGGGGGATGATGAGCTGAAGTGGGGGAAGGCGGCGGAGCAGATGAGGGGGAGCCACGTGGAGGAAGTGAAGGGGATGGTGAGGGAATACCGGAGGGAGGTGGTGACGGTGGGAGGGGAGTCCTTGACGGTGGCGCAGGTGGCGGCCGTGGCGGAGGGGAAGGTGACGGCGGTGGAGTTGGATGAGGGGAAGAGGCGGCGCGTGGAGGAGAGCAGCGCGTGGGTGATTGAGAGCTTGAACAAAGGGATGGATAGTTATGGGGTCACGACGGGGTTCGGTGCCACTTCTCATCGGAGAACCGCCAGAGGGGTGGCGCTACAGGCCGAGCTCATAAGGTTCTTGAACGCCGGAATATTCGGTAACAAAACAGAATCTTTGAGCCACACGCTACCTGCAACTGCAACGAGAGCAGCAATGCTAGTCAGAATAAACACCCTCCTTCAAGGTTACTCAGGCATCAGATTCATCATCCTTGAAGCCATAGCTAAACTCCTCAACCACAACATCACTCCTTGCTTCCCCTTACGTGGTTCCATTTCTGCCTCCGGCGACTTAGTCCCCTTTTCATATCTCGCCGGACTTTTGACCGGAAGGCCCAATTCAAGAGCCGTGGGCCCCACCGGCGAGACTCTTTCTCCCTCGGAAGCCTTCAAACTGGCGAATATCCATGTGGGGTTCTTTGAATTGCAGCCAAAAGAGGGTCTTGCACTTGTTAATGGAACTGGGGTTGGTGCTGGTTTGGCTTCCATGGTTCTTTTTGATGCTAACATTTTGACCGTTCTATGTGAAGTTATGTCTGCGGTTTTTGCTGAAGTAATGCATGGGAAGATGGAGTTTACTGATCACTTGACACATAGGTTGAAGCATCATCCTGGGCAGATTGAAGCAGCTGCAATAATGGAACATATTTTGGATGGGAGTGCTTATGTTAAAGCAGCGCAGAAATTGCATGAGATTGATCCTTTTCAAAAGCCTAAGCAAGATAGGTATGCTCTTAGGACTTCACCTCAATGGCTGGGTCCTCAGATTGAGGTTATAAGGTCATCAACGAAGTGTATTGAGAGGGAGATCAACTCTGTGAATGATAACCCTTTGATTGATGTTTTGAGGAATAGAGTTGTTCATGGTGGTAATTTTCAGGGTACCCCTGTTGGTGTTTCTATGGATAACACAAGATTAGCTTTGGCTGCCATTGGAAAGCTTGTTTTTGCTCAAATGTCTGAACTGGTTAATGATTTTTACAATAATGGTTTGCCTTCAAATCTGTCTGGGGGGAAATGTCCAAGCTTGGATTATGGATTCAAGGGTGCTGAGATAGCTATGGCTTCATATTGTTCTGAGCTTCAGTATCTGGGAAACCCAGTTACTAATCATGTTCAAAGTGCAGAACAGCACAATCAAGATGTGAACTCATTAGGATTAATCTCTGCAAGGAAAACAGCTGAAGCAGTTGAGATTTTGAAGTTGATGGTTTCAACCTACTTGGTTGCTCTGTGTCAAGCCATAGATTTGAGGCATTTGGAGGAAAACTTGAAGTACACGGTTAAGAACACAGTGAGCCAAGTGGCCAAGAAGATCCTGACAGTGGGGGCTAATGGAGAGCTTCGTCCTTCAAGATTTTGTGAGAAAGATTTGCTCAAAGTGGTTGATAGGGAACATGTTTTTGGATATATTGATGACCCTTGTAATGCAACTTACCCACTGATAGAAAAGCTAAGGCGTGTTCTTGTGGAGCATGCATTGATCAAGAGTAATGATGGTTTGGGAAGTGGATATGCTTCCATATTCCTCAAGATCCGTGCTTTTGAAGAGGAACTGAAGGAAGTGTTGCCCAATGAGGTTGAATCTGCAAGAAATGCTTTTGAGAAGGGCATTTCAGCAATACCTAACAAGATTAAAGATTGCAGGTCCTATCCGATTTACAGGTTTGTAAGGGAGGAGTTGGGAACACAATTCTTAACTGGAGAGAAAAGTCGGTCACCAGGAGAAGATTTTGACAAGGTTTTCACTGCAATTAGCGAACGAAAGTTGATTGATCCAATGTTTGAATGCTTAAACGATTGGAACGGTGCACCTCTTCCAATATGTTGA 2097 0.4654 MSAGDDELKWGKAAEQMRGSHVEEVKGMVREYRREVVTVGGESLTVAQVAAVAEGKVTAVELDEGKRRRVEESSAWVIESLNKGMDSYGVTTGFGATSHRRTARGVALQAELIRFLNAGIFGNKTESLSHTLPATATRAAMLVRINTLLQGYSGIRFIILEAIAKLLNHNITPCFPLRGSISASGDLVPFSYLAGLLTGRPNSRAVGPTGETLSPSEAFKLANIHVGFFELQPKEGLALVNGTGVGAGLASMVLFDANILTVLCEVMSAVFAEVMHGKMEFTDHLTHRLKHHPGQIEAAAIMEHILDGSAYVKAAQKLHEIDPFQKPKQDRYALRTSPQWLGPQIEVIRSSTKCIEREINSVNDNPLIDVLRNRVVHGGNFQGTPVGVSMDNTRLALAAIGKLVFAQMSELVNDFYNNGLPSNLSGGKCPSLDYGFKGAEIAMASYCSELQYLGNPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMVSTYLVALCQAIDLRHLEENLKYTVKNTVSQVAKKILTVGANGELRPSRFCEKDLLKVVDREHVFGYIDDPCNATYPLIEKLRRVLVEHALIKSNDGLGSGYASIFLKIRAFEEELKEVLPNEVESARNAFEKGISAIPNKIKDCRSYPIYRFVREELGTQFLTGEKSRSPGEDFDKVFTAISERKLIDPMFECLNDWNGAPLPIC 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0311 698 FunFam Phenylalanine ammonia-lyase 244 553 - -
Mibi07g0311 698 Gene3D - 510 632 IPR023144 -
Mibi07g0311 698 FunFam Phenylalanine ammonia-lyase 1 243 - -
Mibi07g0311 698 Gene3D Fumarase/aspartase (Central domain) 245 693 - -
Mibi07g0311 698 Pfam Aromatic amino acid lyase 44 512 IPR001106 -
Mibi07g0311 698 FunFam Phenylalanine ammonia-lyase 510 632 - -
Mibi07g0311 698 PANTHER HISTIDINE AMMONIA-LYASE 6 698 IPR001106 -
Mibi07g0311 698 SUPERFAMILY L-aspartase-like 6 698 IPR008948 GO:0003824
Mibi07g0311 698 Gene3D - 1 243 IPR024083 -
Mibi07g0311 698 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 7 688 IPR005922 GO:0005737|GO:0006559|GO:0016841
Mibi07g0311 698 CDD PAL-HAL 42 507 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0311 Mibi-ChrMibi07 3835541 3839499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0311 5 698 Monolignol Biosynthesis Gene Families AT2G37040 76.691 0.0 1122