Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0298 ATGAAGGATTCTTGGTTTTTTGACAAGAATTTTAATGGTTTGTCGGATGAAATTTTTGATGATGTCATCAAATTTTTTGACTTCCCGCTGGAAGATGTGGAACCTAATGCTGTGGAAGAAGATTGGGATGCCCAATTCAAACGCCTTGAAGAGCCATATTATGATGCCCTCTCCGTGGCACCTTCGGGCGTGTGTGATAAAACTCGAAAAGGCAATCCAAAACTTGAGAGAATATCTACTTCTCGTGCCAAGTTTTCCCCAATAGATCAAGTGCCAGAGACTACAAAAGTGTCATATGTCAAAACCATTCCGAATCCAAAGGTCTCTTCCAACAGCAAGGATTTCTTCCAGTTCCAAATCTACAGTCCGGTCTCTGTTTTTGAAAGCAGTAGTTCTTCGTCAGGTGAGAATGCCTTTGATCAGCCTGCCATCCGAAAGCGAGCTCGCAGCAAACGCCGCCCTCTCTCAAGCCTCAGCCCTCTATTCTCAGTTCCTTTCATCTCTTCTCCACAAGCTTTCCGAAAACCTCCAAGGGCAGCTGCTGCTCAATCTGATATTGAAACATTCCTCACTTGGAAGCCATCTTATGGTCCCAAAGAAAAGCAAACAAAAAAGGATCCGTTTGTTATGAAGAGATCATCGTGGAAGGAGCCAATCATGCCCAGAAAATGCATGCATTGTCACGTTGCAAAGACCCCCCAGTGGAGGGAGGGACCTATGGGCCCAAAAACCCTATGCAATGCATGTGGGGTTCGATACCGGTCTGGTCGCCTCTATCCCGAATACCGGCCTGCTGCGAGTCCAACTTTTGTTGCATCAATGCACTCTAACTGTCACAAGAAGGTCTTGGAAATGAGAAACAGAGCTACCAGTGAAGCTGATGAAGGTTCTACATTGCCTTTGTCCTCAAAATCTTCAGGAAATTCGCTAGTATAA 936 0.453 MKDSWFFDKNFNGLSDEIFDDVIKFFDFPLEDVEPNAVEEDWDAQFKRLEEPYYDALSVAPSGVCDKTRKGNPKLERISTSRAKFSPIDQVPETTKVSYVKTIPNPKVSSNSKDFFQFQIYSPVSVFESSSSSSGENAFDQPAIRKRARSKRRPLSSLSPLFSVPFISSPQAFRKPPRAAAAQSDIETFLTWKPSYGPKEKQTKKDPFVMKRSSWKEPIMPRKCMHCHVAKTPQWREGPMGPKTLCNACGVRYRSGRLYPEYRPAASPTFVASMHSNCHKKVLEMRNRATSEADEGSTLPLSSKSSGNSLV 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0298 311 MobiDBLite consensus disorder prediction 292 311 - -
Mibi07g0298 311 CDD ZnF_GATA 223 270 IPR000679 GO:0006355|GO:0043565
Mibi07g0298 311 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 219 279 - -
Mibi07g0298 311 PANTHER GATA TRANSCRIPTION FACTOR 39 293 - -
Mibi07g0298 311 Pfam GATA zinc finger 224 257 IPR000679 GO:0006355|GO:0043565
Mibi07g0298 311 SMART GATA_3 218 268 IPR000679 GO:0006355|GO:0043565
Mibi07g0298 311 MobiDBLite consensus disorder prediction 132 152 - -
Mibi07g0298 311 MobiDBLite consensus disorder prediction 288 311 - -
Mibi07g0298 311 FunFam GATA transcription factor 214 298 - -
Mibi07g0298 311 Gene3D - 216 292 IPR013088 GO:0006355|GO:0008270
Mibi07g0298 311 ProSiteProfiles GATA-type zinc finger domain profile. 222 254 IPR000679 GO:0006355|GO:0043565
Mibi07g0298 311 ProSitePatterns GATA-type zinc finger domain. 224 249 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0298 Mibi-ChrMibi07 3695742 3698052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0298 8 294 C2C2-Gata Transcription Factor Family AT1G08010 36.039 2.62e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mibi07g0298 GATA 9.6e-16 CL0167