Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0296 ATGAAGGAAGAAGCTGAGAAAAGCTTGGATCCACAACTATGGCATGCTTGTGCTGGAGGTATGGTTCAGATGCCATCTCTCAACTCGAAAGTTTTCTACTTTCCTCAAGGCCACGCCGAGCACGCTCACGCAGCCGTTGATTTCGCCGCCTCCTTGAGGATCCCACCACTCATTCTCTGCCGCGTGGCCGCCGTCAAATTCCTCGCCGACCCAGAAACCGACGAGGTCTTCTCCAAGATAAAGTTGATTCCTTTAAGGAATTCCGAGGTGGATGAAGCCGAATCCGACGAAAACAACACCCACGGTTCTGAAAATCACGAAAAGCCTGCATCTTTCGCCAAGACTTTAACTCAGTCAGATGCTAACAATGGTGGGGGTTTCTCTGTTCCGAGGTACTGTGCTGAGACTATATTCCCTCGGCTTGATTACTCCGCTGAACCGCCGGTTCAGACCGTGATTGCTAAGGATGTTCATGGGGAGATTTGGAAGTTTAGGCATATTTACAGGGGGACACCTCGTCGTCACTTGTTGACAACAGGGTGGAGCACTTTTGTAAACCAGAAGAAACTTGTGGCAGGGGACTCTGTTGTGTTCTTGAGGGCTGAAAGTGGTGATCTTTGTGTTGGGATTCGCCGTGCTAAGCGTGGGATCGGAGTTGGATCAGATGGAATCTCTGGTTGGAGCTCTGGCGCTGGTGGGAGCTGTGTGGGGCCATATGGGGCTCTTAGTGTGTTGCTGAGAGAGGAGAGTAAGCTTCTGAGGAATAATTCTAATGGTGGGAATTCAAATCCTGGTAGGGGAAAAGTGAGACCAGAATCTGTGATGGAGGCTGTGACACTTGCTGCCAATGGTCAAGCATTTGAGGTTGTTTATTACCCAAGAGCAAGTACTCCTGAGTTTTGTGTGAAATCTGAGTCTGTTAAGGCAGCTATGAGGATTCAGTGGTGTTCTGGGATGAGGTTTAAGATGGCCTTTGAGACTGAGGATTCTTCTAGGATTAGCTGGTTCATGGGCACTGTTTCTTCTGTTCAAGTTGTTGATCCTATTCGCTGGCCAAATTCTCCTTGGAGACTTCTTCAGGTTACTTGGGATGAGCCAGATTTGTTACAGAATGTGAAGAGGGTTAGTCCATGGTTGGTTGAACTGGTATCGAACAGGCCGGTGATCCCTCTCATGCCGTTCTCTCCACCTCGGAAGAAGATGCGGCTTCCTCAACACCTAGACTTCCCGTTTGATGGCCACTTTTCGATACCGACATTTCCCGGTGGCAACCCCCTCGGGCCCAGCAGCCCCTTGTGTTGTCTTTCCGATAATGCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTCGGAATATCTCTTTCAGATCTCCACCTTAACAATAAGTTGCAGTTGGGGCTGCTTTCGAATAACATCCAGCAGCTTGATGTGCATCATCCTGGGATTTCTAATGGCAGTTTAATGATGAGCCATGACAAAAAAAATGAGAGCTTGTCATGCTTGCTTACCATGGGAAATTCTAACAAGAGTTTGGAGAAATCTGATAATGTTGTGAAGAGGCACCAGTTTCTTCTCTTTGGACAGCCAATTCTGACTGAGCAACAAATTTCCCAAAGCTGTCATGCTGAAATGTGGTCTCGGAACTTTTTGCATAAGAATTCGCCAGATGAATGTAAGGATAAGGCAATGAGCTTTTTGGGTGGATCCCAATCCGTGGTTTCTCAGCCAGGATTATCTTCTACAACCGACTTCTCTTGGCAACTTGGCTTGGATACAGGCCATTGCAAGGTATTCATGGAGTCAGAAGATGTCGGGCGCACCCTAGACCTTTCGTGTCTCACCTCTTACGAAGAGCTGTACCAGAAACTGGCTGACATGTTCGGACTTGAAAGATCTGAGATGTTGAGCCGTGTGCTCTACCGAGATGCTTCTGGTGCTGTCAAACGAACTGGAGAAGAACCCTTCAGTGACTTCATGAAAACAGCGAAAAGATTGACAATTCTGACAGATTCGAACAGCAAAGATCTTAGGAGGGTGTGGATAACAGGATCTCGGAATGGAGATCATGGACTGGACGCATCAAACAAGACAGGATTTCTGAGCATATTTGCCTAA 2118 0.4783 MKEEAEKSLDPQLWHACAGGMVQMPSLNSKVFYFPQGHAEHAHAAVDFAASLRIPPLILCRVAAVKFLADPETDEVFSKIKLIPLRNSEVDEAESDENNTHGSENHEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSVVFLRAESGDLCVGIRRAKRGIGVGSDGISGWSSGAGGSCVGPYGALSVLLREESKLLRNNSNGGNSNPGRGKVRPESVMEAVTLAANGQAFEVVYYPRASTPEFCVKSESVKAAMRIQWCSGMRFKMAFETEDSSRISWFMGTVSSVQVVDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNRPVIPLMPFSPPRKKMRLPQHLDFPFDGHFSIPTFPGGNPLGPSSPLCCLSDNAPAGIQGARHAQFGISLSDLHLNNKLQLGLLSNNIQQLDVHHPGISNGSLMMSHDKKNESLSCLLTMGNSNKSLEKSDNVVKRHQFLLFGQPILTEQQISQSCHAEMWSRNFLHKNSPDECKDKAMSFLGGSQSVVSQPGLSSTTDFSWQLGLDTGHCKVFMESEDVGRTLDLSCLTSYEELYQKLADMFGLERSEMLSRVLYRDASGAVKRTGEEPFSDFMKTAKRLTILTDSNSKDLRRVWITGSRNGDHGLDASNKTGFLSIFA 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0296 705 ProSiteProfiles PB1 domain profile. 593 673 IPR000270 GO:0005515
Mibi07g0296 705 Pfam Auxin response factor 277 360 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mibi07g0296 705 ProSiteProfiles B3 DNA-binding domain profile. 112 214 IPR003340 GO:0003677
Mibi07g0296 705 SMART B3_2 112 214 IPR003340 GO:0003677
Mibi07g0296 705 FunFam Auxin response factor 110 214 - -
Mibi07g0296 705 Gene3D - 110 214 IPR015300 -
Mibi07g0296 705 CDD B3_DNA 111 212 IPR003340 GO:0003677
Mibi07g0296 705 SUPERFAMILY DNA-binding pseudobarrel domain 106 215 IPR015300 -
Mibi07g0296 705 Pfam B3 DNA binding domain 112 213 IPR003340 GO:0003677
Mibi07g0296 705 Gene3D - 592 678 - -
Mibi07g0296 705 Gene3D - 315 387 - -
Mibi07g0296 705 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 675 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mibi07g0296 705 FunFam Auxin response factor 315 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0296 Mibi-ChrMibi07 3670096 3673073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0296 1 677 B3 DNA Binding Superfamily AT4G30080 60.204 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mibi07g0296 B3 1.6e-21 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0171 01 1671591 1674351 Mibi07g0296 07 3670096 3673073 CCT