Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0291 ATGGCGACTGCTGTGGCTCCCCATAGAGAAAACAGCAATGGGAGCATCAGCAAGCACCTTGATTCCTCCGGCAAGTATGTCCGATACACGGCGGAGCAGGTTGAAGCGCTTGAACGCGTATACGCTGAGTGCCCCAAGCCCAGCTCCTTGCGAAGGCAACAACTGATCCGAGAGTGCCCTATTCTTGCCAACATTGAACCCAAGCAGATCAAAGTTTGGTTCCAAAATCGCAGGCAAGAGAATGCTCACATGAAGTGTAGAGAGAAGCAGCGAAAGGAGTCAGGGCAGCTTCAGACTGTGAACAGAAAACTGTCTGCAATGAACAAGTTGTTGATGGAGGAAAATGATCGGTTGCAGAAGCAGGTTTCCCAACTAGCGTCAGCAGCAACTGCTGATGTGAGTTGTGATTCGGCAGCCATCACACCTCAGCACTCCTTAAGAGATGCCAATAACCCGGCTGGACTCATGTCAATTGCAGAGGAGACATTGGCAGAGTTCCTTTCTAAGGCTACAGGAACCGCTGTTGATTGGGTCCAGATGCCGGGGATGAAGCCTGGTCCGGAGTCGGTTGGGATCTTTACCATTTCGCGAAGTTGCAGTGGAGTGGCGGCTCGAGCATGTGGTCTTGTTAGTTTAGAACCTACAAAGATTGCGGAGATCTTAAAAGATCGTCCATCTTGGTTTCGGGACTGTCGGAGGCTAGAAGTTTTTACTAAGTTCCCTGCTGGCGATGGTGGAACAATTGAACTTGTGTACACACAGACATATGCTCCAACTACGTTGGCTCCTGCCCGGGATTTCTGGACTCTAAGATACACTACAAGCTTGGAAAATGGAAGTCTTGTGGTTTGTGAGAGATCACTGTCTGGTTCAGGTGCTGGCCCTAACCCAGCAACTGCTGATCAGTTTATTAGAGCTGAGATGCTCCCAAGTGGCTACCTGATTCGACCATGCGAAGGTGGAGGATCAATCATCCATATTGTAGACCACTTCAATCTCAAGGCATGGAGTGTGCCAGAGGTGCTGAGACCACTCTATGAATCATCAAAAGTGGTTGCTCAGAAAATGACAATTGCAGCACTACGCTATGTCAGGCAAATAGCTCAGGAAACAGGTGGTGAAGTCGTTTACGGTTTGGGTAAGCAGCCTGCTCTTCTGCGAACTTTCAGCCAAAGGCTGAGCAGAGGCTTCAATGACGCTGTCAATGGATTTATTGATGATGGCTGGTCCATAATGAACTGTGATGGTGCTGATGATGTTATTATTGCAGTCAACTCAACCAAGAATCTGAGTGGTACTTCTAATCCTGCAAGTTCCCTAACATTCCTTGGAGGAGTTCTCTGTGCGAGAGCTTCCATGTTGCTCCAGAATGTCCCTCCAGGAATCTTGGTTCGGTTTCTGAGGGAGCACCGCTCTGAGTGGGCTGATTTCAATGTTGATGCCTATTGTGCTGCATCGCTTAAGCCAGGCTCCTTTGCCTATCCTGGCATGAAGTTAGCTAGATTCACTGGAACTCAAATTATCATGCCTCTTGGCCATACAATCGAACATGAAGAGATGCTTGAAATTGTTCGTCTTGAAGGTCACTCTCTATCTCAGGAAGAAGGTTTTGCTTCTAGGGACTTTCATCTCTTACAGATATGTAGTGGGGTTGATGAAAATGCTGTTGGGGCATGTTCTGAGCTCGTATTTGCTTCAATTGATGAGTCGTTCCCTGATGATGGTCCAATTTTGCCATCAGGTTTCCGCATCATCCCATTGGAATCAAAATCAGGCGATAAGGATGCAGTAACTGTCAATCGGACACTAGAATTAACATCTGGTCTTGAAGTGGGCCCAGCAACAAATCATGCTCCAGGAGATACATCATCATGCCATAATACTCGGTCAGTGTTGACTATTGCCTTTCAGTTTCCATTTGAGAGCAGCTTGCAGGAAAATGTAGCGATTATGGCACGGCAGTATGTGCGCAGTGTGATTTCATCTGTGCAGAGGGTTGCCTTGGCTATATCTTCCTCTGGTATAAGCCCACCTGTGGGGCCAAAACTCGGTCCTGGCTCTCCTGAAGCAGTTACTCTAACTCACTGGATATGCCGGAGTTATAGTTTCTACGTGGGAGCAGAATTATTGACATCAGATGCACTTGTTGGTGATTCTATGCTGCAAAAATTATGGCATCATCAGGATGCCATTCTGTGTTGTTCGGTGAAGTCCGTGCCCGTGTTCATCTTTGCAAACCAGGCGGGGCTAGACATGCTGGAAACAACTCTAGTAGCTCTGCAAGATATCACATTGGATAAAATATTTGACGAATCTGGACGAAAGACGTTGTACACAGAATTCGCCAAGTTGATGCAGGAGGGGTTCACTCATCTGCCTGCTGGAGTCTGCACGTCCATGATGGGACGGCATGTTTCGTATGAGCAAGCTTTTGCATGGAAAGTTCTTGCTGAAAATAACAGTGTTCATTGCTTGGCTTTCTCTTTCATAAATTGGTCATTTGTATGA 2508 0.4721 MATAVAPHRENSNGSISKHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILANIEPKQIKVWFQNRRQENAHMKCREKQRKESGQLQTVNRKLSAMNKLLMEENDRLQKQVSQLASAATADVSCDSAAITPQHSLRDANNPAGLMSIAEETLAEFLSKATGTAVDWVQMPGMKPGPESVGIFTISRSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRRLEVFTKFPAGDGGTIELVYTQTYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGSGAGPNPATADQFIRAEMLPSGYLIRPCEGGGSIIHIVDHFNLKAWSVPEVLRPLYESSKVVAQKMTIAALRYVRQIAQETGGEVVYGLGKQPALLRTFSQRLSRGFNDAVNGFIDDGWSIMNCDGADDVIIAVNSTKNLSGTSNPASSLTFLGGVLCARASMLLQNVPPGILVRFLREHRSEWADFNVDAYCAASLKPGSFAYPGMKLARFTGTQIIMPLGHTIEHEEMLEIVRLEGHSLSQEEGFASRDFHLLQICSGVDENAVGACSELVFASIDESFPDDGPILPSGFRIIPLESKSGDKDAVTVNRTLELTSGLEVGPATNHAPGDTSSCHNTRSVLTIAFQFPFESSLQENVAIMARQYVRSVISSVQRVALAISSSGISPPVGPKLGPGSPEAVTLTHWICRSYSFYVGAELLTSDALVGDSMLQKLWHHQDAILCCSVKSVPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKTLYTEFAKLMQEGFTHLPAGVCTSMMGRHVSYEQAFAWKVLAENNSVHCLAFSFINWSFV 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0291 835 CDD homeodomain 25 87 IPR001356 GO:0003677
Mibi07g0291 835 SUPERFAMILY Bet v1-like 405 592 - -
Mibi07g0291 835 SMART HOX_1 22 88 IPR001356 GO:0003677
Mibi07g0291 835 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 22 835 IPR044830 GO:0003700
Mibi07g0291 835 Coils Coil 97 128 - -
Mibi07g0291 835 MobiDBLite consensus disorder prediction 1 20 - -
Mibi07g0291 835 ProSiteProfiles 'Homeobox' domain profile. 20 84 IPR001356 GO:0003677
Mibi07g0291 835 Pfam MEKHLA domain 692 834 IPR013978 -
Mibi07g0291 835 ProSiteProfiles START domain profile. 148 376 IPR002913 GO:0008289
Mibi07g0291 835 SUPERFAMILY Bet v1-like 157 369 - -
Mibi07g0291 835 Pfam START domain 158 366 IPR002913 GO:0008289
Mibi07g0291 835 Gene3D - 190 372 IPR023393 -
Mibi07g0291 835 SMART START_1 157 367 IPR002913 GO:0008289
Mibi07g0291 835 Pfam Homeodomain 25 79 IPR001356 GO:0003677
Mibi07g0291 835 CDD START_ArGLABRA2_like 152 368 - -
Mibi07g0291 835 SUPERFAMILY Homeodomain-like 20 83 IPR009057 -
Mibi07g0291 835 CDD bZIP 75 123 - -
Mibi07g0291 835 Gene3D - 17 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0291 Mibi-ChrMibi07 3625265 3630783 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0291 1 835 Homeobox Transcription Factor Family AT5G60690 77.113 0.0 1358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi07g0291 START 3.3e-49 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0291 07 3625265 3630783 Mibi07g0291 07 3625265 3630783 ECH