Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0283 ATGCGATTGATCTGTTGGCAACAGTTACCTCTACTCATTGTGATTCAACTTCTACATCCTAACAAACTCAGCCACAAGTTATATGCTGAAGCTTTGCTCACTTTCAAGATCACGCTTGGCTGTCCACAGCAAATCTCATGCAGTATTTCGAAATATCCATGTCAAAGGCAAAGGGCTTGTCTGCACTTCAATGAACTAAAAAGACTCAGGTATAATGGGGTAGCAGCAAAGATAGATGGGACAAATGAAGTTCCAACACTTACACCTTTGCAAGAAGCTCAAGTTAAAAGACCTGGAGGAAGGTGGGCTGCTACCATTATTGGTGCTGCTGCTGCTGCATTACTTGTGATTGTCATATTAGTAATAGTTTATGCCTGTTTGATGCGTATCAAGAGATTTTTAAGGCAATCATCTGACAATGCTTCTTCTTTTCCATCTTCAACCGTTGAATTGGGAATAGGCAGCACCTCACAGGACATTAGGCAGTTCACAATTATGGAACTTGAACAAGCCACAAGAAATTTCAGTGAAAGTAACCTTGTGGGTGAAGGTAGATTTGGTTTGGTTTACAAGGGTTTACTTCAAGATGGATCTTTAGTCGCTATAAAAAGGCGCCGATATGCTTTGATTCACAGTTTCATCCCTAAGGTGATGCAAATAGCTAACATTCACCACATCCATCTTGTCAAGCTTATTGGTTATTATGAAGATGGCTATCAACAGTTACTTGTGCAAGAATATCCTCCTAATGGAAATGTAGGGAATCACCTATATGACAATGAGGGCTTACCGATTGGAAGGTTAGATATGCAGCGAAGACTATCTACAGCTTTGGGTGCTTCCAAAGGAATGGAACATCTTCACTGCTTGGTTCCTCCTTTGGTGCACTCAAATTTCAGAACTAGCAATGTTCTTGTGGATGAAAGCTTCACTGCCAAGGTTTCTGATTATGGACTCTGCAAGCTGCTAACTAATTCTGACCATAATGCTGGCTCATCCTCCGACACAGACTGCTTTTATGACCCAGAGTTGAACCAATCAAATGATTTCTCAAAGAAGAGTGATGTATACAGTTTTGGGGTCTTCTTACTTGAATTGATCAGTGGACGAGAAGTGCATAACAGAAGCCTCCCAAACTCGCAAGAGAATCTTCTATCTCAGGCGCAAAAGCTGAAAATCATTCTTGTATCTGATTGCCTTGATTCATTGACGTCAGGCGCAAAAAATTCAAACTTCCTTTCTTATTGTCAACCTTCTCCATTTACTGCACTCTTGAGTTTGTGGAAAGCTGAGGCGGAGAAAGAGAGATCTTATTTCTCACACAGAGAAGAGAAGCTTGAAATTTCGAAAACTTTGAGAATGCAACGTCGGCGACTCATCGTTTTTCTTTCCCTCACTGCCCTTCTTCTTCTATCATCCTTCTCTCTCACTTTATGCAAGGCCGCGGAAAACGACAAAGACGACGACGAAGATCTCAGCTTTCTCGAGGAATCCGATGATAGCCCCACCTCCGACAATCATTTCCCAGATCTGGATCATTACGACGATGGTCCCGTCGACGACGATGATTTTGAGGATTTCTCCGGCTTCGACGAGTCCGAGGTCGATTCGGACGAATTCAAAGAACCCAAGGTGGATGACAAAGATGTTGTTGTATTAAAGGAGGGAAATTTCAGTGATTTTGTGAAGAAAAATCAGTTTGTGATGGTGGAATTTTACGCGCCTTGGTGTGGTCATTGCCAAGCTTTGGCTCCAGAATATGCTGCGGCTGCCACTGAGTTGAAGGGTGAGAATGTCATTCTGGCGAAGGTGGATGCGACTGAGGAGAATGAATTAGCACAGGAATATGAAATTCAAGGATTCCCTACTGTCTTTTTCTTTGTTGATGGGGTTCACAAGCCTTACAATGGCCAGAGGAACAAAGATGCTATAGTAACTTGGATTAAGAAGAAGATAGGACCCGGTGTTTCCAATGTAACTACATTGGATGATGCTGAACGCGTATTGACCTCTGAAAACAAAGTTGTTTTGGGCTTCCTCAACTCTTTAGTGGGTCCTGAGAGTGAGGAGCTAGCTGCTGCATCCCGACTTGAGGATGATGTCAATTTTTATCAAACTGCTAATCCTGATGTGGCAAAGCTTTTCCATATTGACCCAAATGTCAAACGTCCTGCTTTGGTCCTGCTCAAGAAAGAGGAGGAGAAATCGAACATTTTTGATGGCAAATTTGTAAAATCTGCAATCGCTGAATTTGTGTTCTCAAACAAACTTCCTCTGGTCACAACTTTTACAAGAGAAAGCGCCCCAGCAGTTTTTGACAACCCAATCAAGAAACAGCTGTTGCTCTTTGTGACTTCAAATGATTCAGAGAAGTTACTCCCAGTATTCCAAGAAGCAGCAAAATTTTTCAAGGGAAAGCTGATCTTTGTACATGTGGAGCTGGATAATGAAGATGTTGGGCAGCCAGTTTCCGAATTCTTTGGCATCAGTGGGAATGCTCCAAAAGTACTTGCATACACTGGAAATGATGATGGAAAGAAATTTGTGCTTGATGGAGAAGTGACTGTTGAGAAAATTAAGGCATTCGGGGATGATTTCCTTGAAGACAAGCTAAAACCTTTCTACAAGTCAGATCCAGTTCCTGAGAATAACGATGGGGATGTGAAAATAGTGGTTGGGGATAACTTTGACGAGATTGTCTTGGATGAGTCTAAGGATGTTCTCCTTGAGATTTATGCACCGTGGTGTGGCCATTGCCAAGCTTTGGAACCAACATACAACAAGCTTGCTAAACATCTGCGTGGCATTGAGTCTCTTGTCATAGCTAAGATGGACGGAACAACAAATGAGCATCCTAGGGCTAAGACTGATGGATTCCCCACCATTCTCTTCTTCCCTGCCGGAAACAAGAGTTTTGACCCTATTACTGTCGATACCGATCGTACGGTGGTGGCCTTTTATAAGTTCATAAAGAAACATGCATCAATCCCATTCAAGCTCCAGAAACCAACCACAGGTGCCAAATCTACTACTTCTGATGATGCCAAGGAGAGTAAGAGCCAGAGCCAGAGCCAGAGTCAGAGTAGCAGCAATGATGTGAAGGATGAATTGTGA 3114 0.4261 MRLICWQQLPLLIVIQLLHPNKLSHKLYAEALLTFKITLGCPQQISCSISKYPCQRQRACLHFNELKRLRYNGVAAKIDGTNEVPTLTPLQEAQVKRPGGRWAATIIGAAAAALLVIVILVIVYACLMRIKRFLRQSSDNASSFPSSTVELGIGSTSQDIRQFTIMELEQATRNFSESNLVGEGRFGLVYKGLLQDGSLVAIKRRRYALIHSFIPKVMQIANIHHIHLVKLIGYYEDGYQQLLVQEYPPNGNVGNHLYDNEGLPIGRLDMQRRLSTALGASKGMEHLHCLVPPLVHSNFRTSNVLVDESFTAKVSDYGLCKLLTNSDHNAGSSSDTDCFYDPELNQSNDFSKKSDVYSFGVFLLELISGREVHNRSLPNSQENLLSQAQKLKIILVSDCLDSLTSGAKNSNFLSYCQPSPFTALLSLWKAEAEKERSYFSHREEKLEISKTLRMQRRRLIVFLSLTALLLLSSFSLTLCKAAENDKDDDEDLSFLEESDDSPTSDNHFPDLDHYDDGPVDDDDFEDFSGFDESEVDSDEFKEPKVDDKDVVVLKEGNFSDFVKKNQFVMVEFYAPWCGHCQALAPEYAAAATELKGENVILAKVDATEENELAQEYEIQGFPTVFFFVDGVHKPYNGQRNKDAIVTWIKKKIGPGVSNVTTLDDAERVLTSENKVVLGFLNSLVGPESEELAAASRLEDDVNFYQTANPDVAKLFHIDPNVKRPALVLLKKEEEKSNIFDGKFVKSAIAEFVFSNKLPLVTTFTRESAPAVFDNPIKKQLLLFVTSNDSEKLLPVFQEAAKFFKGKLIFVHVELDNEDVGQPVSEFFGISGNAPKVLAYTGNDDGKKFVLDGEVTVEKIKAFGDDFLEDKLKPFYKSDPVPENNDGDVKIVVGDNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYNKLAKHLRGIESLVIAKMDGTTNEHPRAKTDGFPTILFFPAGNKSFDPITVDTDRTVVAFYKFIKKHASIPFKLQKPTTGAKSTTSDDAKESKSQSQSQSQSSSNDVKDEL 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0283 1037 FunFam Protein disulfide-isomerase 757 882 - -
Mibi07g0283 1037 CDD PDI_a_family 551 648 - -
Mibi07g0283 1037 ProSitePatterns Thioredoxin family active site. 908 926 IPR017937 -
Mibi07g0283 1037 MobiDBLite consensus disorder prediction 1001 1037 - -
Mibi07g0283 1037 Gene3D Phosphorylase Kinase; domain 1 149 247 - -
Mibi07g0283 1037 TIGRFAM ER_PDI_fam: protein disulfide isomerase 548 1021 IPR005792 GO:0003756
Mibi07g0283 1037 ProSiteProfiles Protein kinase domain profile. 175 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0283 1037 SUPERFAMILY Thioredoxin-like 544 653 IPR036249 -
Mibi07g0283 1037 FunFam protein disulfide-isomerase A2 652 756 - -
Mibi07g0283 1037 Pfam Thioredoxin-like domain 691 863 - -
Mibi07g0283 1037 Gene3D Transferase(Phosphotransferase) domain 1 249 455 - -
Mibi07g0283 1037 CDD PDI_a_PDI_a'_C 888 990 - -
Mibi07g0283 1037 MobiDBLite consensus disorder prediction 500 514 - -
Mibi07g0283 1037 ProSitePatterns Protein kinases ATP-binding region signature. 181 203 IPR017441 GO:0005524
Mibi07g0283 1037 CDD PDI_b_family 656 755 - -
Mibi07g0283 1037 Pfam Thioredoxin 550 650 IPR013766 -
Mibi07g0283 1037 Pfam Thioredoxin 888 973 IPR013766 -
Mibi07g0283 1037 ProSiteProfiles Thioredoxin domain profile. 531 653 IPR013766 -
Mibi07g0283 1037 FunFam Protein disulfide-isomerase 883 996 - -
Mibi07g0283 1037 CDD PDI_b'_family 777 867 - -
Mibi07g0283 1037 MobiDBLite consensus disorder prediction 489 515 - -
Mibi07g0283 1037 MobiDBLite consensus disorder prediction 1002 1031 - -
Mibi07g0283 1037 Pfam Protein tyrosine and serine/threonine kinase 179 379 IPR001245 GO:0004672|GO:0006468
Mibi07g0283 1037 PRINTS Thioredoxin family signature 568 576 - -
Mibi07g0283 1037 PRINTS Thioredoxin family signature 576 585 - -
Mibi07g0283 1037 PRINTS Thioredoxin family signature 617 628 - -
Mibi07g0283 1037 ProSiteProfiles Thioredoxin domain profile. 866 995 IPR013766 -
Mibi07g0283 1037 Gene3D Glutaredoxin 653 756 - -
Mibi07g0283 1037 Gene3D Glutaredoxin 757 881 - -
Mibi07g0283 1037 SUPERFAMILY Thioredoxin-like 755 885 IPR036249 -
Mibi07g0283 1037 SUPERFAMILY Thioredoxin-like 659 767 IPR036249 -
Mibi07g0283 1037 Gene3D Glutaredoxin 882 996 - -
Mibi07g0283 1037 Gene3D Glutaredoxin 538 652 - -
Mibi07g0283 1037 PANTHER PROTEIN DISULFIDE ISOMERASE 469 1016 - -
Mibi07g0283 1037 SUPERFAMILY Thioredoxin-like 883 995 IPR036249 -
Mibi07g0283 1037 TIGRFAM pdi_dom: protein disulfide-isomerase domain 554 651 IPR005788 GO:0003756
Mibi07g0283 1037 SUPERFAMILY Protein kinase-like (PK-like) 157 398 IPR011009 -
Mibi07g0283 1037 FunFam Protein disulfide-isomerase 539 651 - -
Mibi07g0283 1037 ProSitePatterns Thioredoxin family active site. 569 587 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0283 Mibi-ChrMibi07 3514919 3522929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0283 163 389 Glycoside Hydrolase AT3G07070 41.949 1.85e-46 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Mibi07g0283 PK_Tyr_Ser-Thr 5.5e-31 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0160 01 1606565 1610236 Mibi07g0283 07 3514919 3522929 CCT