Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0278 ATGAGTACAGAGCAAAAGCCAGTGAGTGAAGCACATGATGTTGTTTCTTGCCAAAGAACAGCTTCTCTTCCAGTTCACAAGGTTGATGATAGAATGGGAATAAGCGAAGAGTCCACACATACTCGTCGCTGGAAGAGAGAGAACCTTTCACTACAAATACCCTCAAGAACATCAGAAGAGTCTCCTCAAGAGTTTGTAACAATCAAGATGCCTCAGACTCCAAGTCCTACTCCAACTCCCAAGAGAGTGAATTTTCTGGTGACTTCTCTCTCTGTTGATACCTCTATTAATAAGTCTCCAGGATCTTCAGTATCAAGAGGAAGACCATCCATAAGAAGTCTCCTACCAAAACTAAACTTTATTTCTCGGGCAACCTTGGATGTCGAAAAGGGTTCTACTGCAGCTTCTGAGTCTTCCTCTTCAGGCACACGGGAAAAGCCTTCAATCTCAAGAACTTTGTCCCTTACTAAAATATTTACTCCCAGGATTAAGAGGACCTCTTCATTGCCAGTGGATGAATTTGCACATTCAGAATCTGCTCATGCTGGAACTGTTGGTGCTTCTTTGCAGAAAAGCTCTGCTCAGAGGCAGATAGTTCGCTCTCTTTCCGTGCCTGCCAACAGTAAAGAGAAAAGCTTAAGGAGAATGGATTCATTTTTCCGTGTTATTCCTTCCACACCACGAGTGAAGGATGGAATTGAATTATCGACAGCATCCCCCTCAAAGGATTCTGAAAACGATGTTGGTGATGGTGAAGATATAGCTGAAGAAGAGGCTGTATGTAGAATTTGTATGATTGATCTATGTGAAGGGGGTGAAACTTTCAAGCTGGAATGCAGCTGCAAAGGTGAACTTGCTCTAGCACACAAAGAATGTGCTATTAAGTGGTTTAGCGTCAAAGGTAACAGAACATGTGATGTGTGCAAGGAGGATGTTCGGAACCTACCTGTCACTCTTCTGCGGATTCAAAGTGTCCGGGCCCGACATACCGGAATAAGCAGGTCTCATCTTGAAGATGTGAATGAATATAGGGTTTGGCAAGAAATTCCTGTTCTAGTCATTGTCAGCATGCTTGCCTATTTCTGTTTTCTTGAGCAGCTATTGGTTGGAAAGCTGGGTACTAAGGCAATTGCCATATCTCTTCCGTTTTCATGTGTATTGGGTCTTCTATCTTCCATGACATCATCCACAATGGTTAAGAGCAGGTTCGTTTGGATTTATGCATCGGCTCAGTTTGCTCTGGTGGTTCTCTTTGCACATATATTTTACTCCTTGGTAATTGCAAAAGATATCAATGTGCAGGCAATCCTTTCAATACTTCTTGCTACCTTCGCAGGGTTTGGTGTGGTAATGAGTGGAAGTTCAATTCTTGCGGAGTTTTTTAGATGGAGAAGAAGATGGCAGGTTTTATCAGAACAGAATAATAATAATAATAATAATAATAACGGTCCTCAAGTGATGGCAACTCATTTAGGTTCTTCCACAACCAGGGCACAGAATAACCAGAATCACCAAAACTCAAGTCAGATATTGTCACAAGCTAATAATGAGAGTGCTTCTTCATGA 1566 0.4202 MSTEQKPVSEAHDVVSCQRTASLPVHKVDDRMGISEESTHTRRWKRENLSLQIPSRTSEESPQEFVTIKMPQTPSPTPTPKRVNFLVTSLSVDTSINKSPGSSVSRGRPSIRSLLPKLNFISRATLDVEKGSTAASESSSSGTREKPSISRTLSLTKIFTPRIKRTSSLPVDEFAHSESAHAGTVGASLQKSSAQRQIVRSLSVPANSKEKSLRRMDSFFRVIPSTPRVKDGIELSTASPSKDSENDVGDGEDIAEEEAVCRICMIDLCEGGETFKLECSCKGELALAHKECAIKWFSVKGNRTCDVCKEDVRNLPVTLLRIQSVRARHTGISRSHLEDVNEYRVWQEIPVLVIVSMLAYFCFLEQLLVGKLGTKAIAISLPFSCVLGLLSSMTSSTMVKSRFVWIYASAQFALVVLFAHIFYSLVIAKDINVQAILSILLATFAGFGVVMSGSSILAEFFRWRRRWQVLSEQNNNNNNNNNGPQVMATHLGSSTTRAQNNQNHQNSSQILSQANNESASS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0278 521 MobiDBLite consensus disorder prediction 129 153 - -
Mibi07g0278 521 MobiDBLite consensus disorder prediction 231 251 - -
Mibi07g0278 521 MobiDBLite consensus disorder prediction 495 521 - -
Mibi07g0278 521 SUPERFAMILY RING/U-box 257 311 - -
Mibi07g0278 521 MobiDBLite consensus disorder prediction 1 22 - -
Mibi07g0278 521 MobiDBLite consensus disorder prediction 55 80 - -
Mibi07g0278 521 CDD RING_CH-C4HC3_MARCH 261 309 - -
Mibi07g0278 521 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 248 316 IPR013083 -
Mibi07g0278 521 ProSiteProfiles Zinc finger RING-CH-type profile. 253 315 IPR011016 GO:0008270
Mibi07g0278 521 PANTHER OS02G0165000 PROTEIN 24 479 - -
Mibi07g0278 521 MobiDBLite consensus disorder prediction 55 72 - -
Mibi07g0278 521 Pfam RING-variant domain 261 308 IPR011016 GO:0008270
Mibi07g0278 521 SMART ringv_2 260 309 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0278 Mibi-ChrMibi07 3488572 3492301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0278 247 315 C3H Transcription Factor Family AT2G37950 41.429 5.17e-13 66.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0158 01 1593934 1598417 Mibi07g0278 07 3488572 3492301 CCT