Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0275 ATGTTCGAAAAGAGTTTCTCTACTATAGCGATGGGCTGCTGTGGTTGCTTTGGGTTCATAAGAAAATTCAAACGTCGCAGGAATCAGTCTGGCATGAAGAGTAGTCTCTCTCAGGAGCCATTGTTGGTTGAAACTGAAGACAGATATGATGGTGAGGATGAGGATGATGATGATAGGTCCTATAATGGTGACATTACTGACACCATTAGTGGTGATGATAGTGAAGTTCCTATTCGTGCCAAACGTTCTGAGGAAATTCTAATGTTGAGAGAAGAGAAAGATATGATATGCAGGCAGTTTCCTGTTAAGGAAACTCACAAAGTTGTTCGCACAGAGGATGAAAATGGTAACAAAATGGTAAATGAATATGTTCGGGAGTACAAGATTGGTTCTGGTAGTTATGGGAAAGTGGTTTTATACCGAAGTTGTGTAGATGGAAGGCATTATGCAATCAAGGCCTTTCATAAGTCTCATTTACAGAAGCTTCGAGTTGCACCCTCAGAGACCGCCATGACTGATGTTCTGCGGGAGGTACTCATCATGAAAATGCTGGAACATCCTAATATAGTCAATCTTATTGAGGTGATTGATGACCCTGAATCAGATCACTTCTACATGGTACTCGAATATGTAGAAGGCAAATGGGTTTGTGAGGGCTCAGGTCCTTCTTGTAGCTTGGGTGAGGAGACTGCTAGGAAATACTTGCGTGATATAGTTTCAGGATTAAGATACCTTCATGCTCATAATATAGTGCACGGGGATATTAAACCTGATAATCTGTTGGTTACACGTCATGGTACAGTAAAGATTGGGGACTTCAGTGTCAGCCAGGCTTTTGAGGATGATAATGATGAGCTTCGCCGATCACCTGGGACTCCCGTTTTCACTGCTCCAGAATGTTGTTTAGGTCTTACCTATCATGGTAAAGCTGCAGACACATGGGCAGTTGGAGTTACTTTGTACTGTATGGTTTTGGGTGAATACCCTTTTCTTGGAGACACACTTCAAGATACGTATGACAAAATAGTCAATAATCCATTAGTGCTCCCAGATGATTTGAATCCCCAAATAAGGGACTTACTGGAAGGATTACTTTGCAAAGATCCAGAACATCGGATGACATTGGCCGATGTTGCGCAGCATAGCTGGATTATCGGAGATGATGGGCCAATTCCTGAATATTCGTGTTGGTGCAAACGCAGTAGACTAGGAGGAGAAGATTCAAACAGCATCAACATACTTGCTTGA 1248 0.4223 MFEKSFSTIAMGCCGCFGFIRKFKRRRNQSGMKSSLSQEPLLVETEDRYDGEDEDDDDRSYNGDITDTISGDDSEVPIRAKRSEEILMLREEKDMICRQFPVKETHKVVRTEDENGNKMVNEYVREYKIGSGSYGKVVLYRSCVDGRHYAIKAFHKSHLQKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDHFYMVLEYVEGKWVCEGSGPSCSLGEETARKYLRDIVSGLRYLHAHNIVHGDIKPDNLLVTRHGTVKIGDFSVSQAFEDDNDELRRSPGTPVFTAPECCLGLTYHGKAADTWAVGVTLYCMVLGEYPFLGDTLQDTYDKIVNNPLVLPDDLNPQIRDLLEGLLCKDPEHRMTLADVAQHSWIIGDDGPIPEYSCWCKRSRLGGEDSNSINILA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0275 415 CDD STKc_LKB1_CaMKK 129 384 - -
Mibi07g0275 415 Pfam Protein kinase domain 123 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0275 415 FunFam Serine/threonine-protein kinase Ssp1 117 219 - -
Mibi07g0275 415 ProSiteProfiles Protein kinase domain profile. 123 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0275 415 SUPERFAMILY Protein kinase-like (PK-like) 120 395 IPR011009 -
Mibi07g0275 415 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 74 386 - -
Mibi07g0275 415 FunFam Serine/threonine-protein kinase GRIK2 113 413 - -
Mibi07g0275 415 MobiDBLite consensus disorder prediction 46 61 - -
Mibi07g0275 415 Gene3D Transferase(Phosphotransferase) domain 1 221 391 - -
Mibi07g0275 415 MobiDBLite consensus disorder prediction 30 73 - -
Mibi07g0275 415 ProSitePatterns Protein kinases ATP-binding region signature. 129 152 IPR017441 GO:0005524
Mibi07g0275 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Mibi07g0275 415 SMART serkin_6 123 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0275 415 Gene3D Phosphorylase Kinase; domain 1 117 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0275 Mibi-ChrMibi07 3455336 3459900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0275 129 390 CBL-interacting serine-threonine protein kinases AT5G10930 32.453 4.93e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Mibi07g0275 Pkinase 9.5e-60 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0275 07 3455336 3459900 Mibi07g0275 07 3455336 3459900 ECH