Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0272 ATGAGAACTACACATGTACTTTCTCTGTCATTTTGGTTCCTCGGAGTTTTAGCCTACACTTCGTTTTGTGCCAATGTCACTTACGACCACCGTGCATTGGTCATCGATGGCAAACGTCGTATCCTCATTTCTGGTTCCATTCATTACCCTCGAAGTACTCCTGAGATGTGGCCTGACCTCATTCAGAAATCCAAAGATGGAGGACTGAATGTGATTGAAACATACGTTTTCTGGAACAAGCATGAACCAGTTCGAGGCCAGTATAATTTTGAAGGTGGGAACGATCTAGTGAAATTTGTGAAGTTAGTAGGAGAAGCAGGCCTGTACGTACATCTGCGGATTGGCCCGTATGTATGTGCTGAATGGAACTATGGTGGTTTCCCTCTCTGGTTGCATTTCATTCCTGGAATTCAGTTTCGTACTGATAATGAACCATTCAAGAGAGAAATGCAGCGATTTACTGCTAAAATTGTGGACTTGATGAAGCAAGAGAATCTCTATGCGTCTCAGGGAGGGCCTATTATTTTATCTCAGATTGAAAATGAGTATGGTAACGGTGACATTGAGCCTCGCTATGGGCCTGCTGCTAAACCTTACGTCAAGTGGGCAGCTGCCATGGCTATATCACTCAATACTGGAGTTCCCTGGGTCATGTGCCAGCAAGCAGATGCTCCAGACCCCATTATTAACACTTGCAATGGATTTTACTGTGATCAATTCACGCCAAACTCTAACCAGAAGCCAAAATTTTGGACTGAGAATTGGAGTGGATGGTTCCGATCATTTGGTGGTGCAGTTCCCTACAGACCTGTAGAAGATCTTGCATTTGCCGTGGCACGGTTTTTCCAGCGAGGTGGAACATTACAAAATTATTATATGTACCATGGTGGGACAAACTTTGACCGAACTTCTGGTGGACCATTCATTTCTACCAGTTATGATTATGATGCACCAATTGATGAGTATGGAATTATTAGACAGCCAAAGTGGGGACACCTCAAAGATGTGCATCAGGCCATAATGCTCTGTGAAAAAGCGTTGATAGCTACTGATCCCCAAATTAAATCACTTGGTCCAAATCTAGAGGCTGCAGTTTACCAAGCAGGATCTACATGTGCTGCCTTTCTCTCCAATGTGGGAACCTCATCTGATGCAACAGTAAATTTCAATGGCAATTCCTATCACTTGCCTGCTTGGTCTGTGAGCATCTTACCAGACTGCAAGAATGTAGCACTTAATACTGCAAAGGTTAATTCTCCATCTACCACTTCAAGCTTCACAAAAGAAATTTTCAAAGAAGACAATACTTCTTTAGAAGGTTCTACCTCTGGGTGGAGTTGGACAAGTGAACCAGTAGGTATTTCAAAAGCTGATGCATTCTCAAAAGCAGGATTACTGGAGCAAATAAATACAACAGCAGATAGAAGTGACTACTTGTGGTACTCATTGAGCATTGATCTTGATGGTGGTGGCCCTCAGTCTGTCCTTCACATTGAATCACTTGGCCATGTCGTTCATGCATTTATCAATGGGAAGCTTGCAGGGAGTGGAGTCAATAATGCTGCCAAAAAGTTAGACGTTCCTGTCACTCTTGTTGCTGGGAAGAACACAATTGATCTCCTGAGTCTAACTGTGGGACTTCAGAATTATGGAGCCTTTTTTGACACATGGGGTGCTGGAATAACTGGCCCAGTTAGATTGAACGGTTTGAAAAATGGGAGCACTCTTGATCTCTCCTCTCAGCAGTGGACTTATCAGGTTGGTCTTCAAGGTGAACAATTAGGTCTTTCTGATGGATCTGGAAAATGGAACACGGGGTCTACCTTACCTAAGAATCAACCGTTGATTTGGTACAAGACAAACTTTGAAGCTCCTTCTGGCACTAACCCAGTAGCAATTGACTTCACGGGTATGGGTAAAGGTGAGGCTTGGGTAAATGGACAAAGCATTGGGCGATTCTGGCCCACATATATTGCTCCAAAAAGTGGTTGCAATGAGGCATGCAATTACAGAGGGACTTATAATTCCAACAAGTGTCTCAAAAATTGTGGAAAGCCATCACAATCAATATATCATGTACCTCGATCGTGGCTGCGTCCAAGTGGTAACATACTTGTGTTGTTTGAGGAAAATGGAGGCGATCCAACTCAAATAACTTTTGCTACAAGACAGTTAGAAAGCCTGTGTGCACATGTTTCAGATTCTCACCCACCACCTGTAGATTCATGGAATTCAGACACAGAACTAGGCCCTGTACTTTCACTTGAGTGCCCAAATCCTGATCAGGTTATCTCTTCCATTAAATTTGCTAGCTTTGGAACCCCTCGTGGTACCTGTGGGAACTTCAACCATGGTCGTTGCAGCAGCAAAAGAGCACTCTCCATTTTGCAGAAGGCCTGCGTTGGATCAAGAAGCTGCAGTATTGGAGTGTCAATTGATACATTTGGGGATCCATGCAGAGGAGTGGCAAAGAGTTTGGCAGTTGAAGCTGCTTGTACATAA 2502 0.4365 MRTTHVLSLSFWFLGVLAYTSFCANVTYDHRALVIDGKRRILISGSIHYPRSTPEMWPDLIQKSKDGGLNVIETYVFWNKHEPVRGQYNFEGGNDLVKFVKLVGEAGLYVHLRIGPYVCAEWNYGGFPLWLHFIPGIQFRTDNEPFKREMQRFTAKIVDLMKQENLYASQGGPIILSQIENEYGNGDIEPRYGPAAKPYVKWAAAMAISLNTGVPWVMCQQADAPDPIINTCNGFYCDQFTPNSNQKPKFWTENWSGWFRSFGGAVPYRPVEDLAFAVARFFQRGGTLQNYYMYHGGTNFDRTSGGPFISTSYDYDAPIDEYGIIRQPKWGHLKDVHQAIMLCEKALIATDPQIKSLGPNLEAAVYQAGSTCAAFLSNVGTSSDATVNFNGNSYHLPAWSVSILPDCKNVALNTAKVNSPSTTSSFTKEIFKEDNTSLEGSTSGWSWTSEPVGISKADAFSKAGLLEQINTTADRSDYLWYSLSIDLDGGGPQSVLHIESLGHVVHAFINGKLAGSGVNNAAKKLDVPVTLVAGKNTIDLLSLTVGLQNYGAFFDTWGAGITGPVRLNGLKNGSTLDLSSQQWTYQVGLQGEQLGLSDGSGKWNTGSTLPKNQPLIWYKTNFEAPSGTNPVAIDFTGMGKGEAWVNGQSIGRFWPTYIAPKSGCNEACNYRGTYNSNKCLKNCGKPSQSIYHVPRSWLRPSGNILVLFEENGGDPTQITFATRQLESLCAHVSDSHPPPVDSWNSDTELGPVLSLECPNPDQVISSIKFASFGTPRGTCGNFNHGRCSSKRALSILQKACVGSRSCSIGVSIDTFGDPCRGVAKSLAVEAACT 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0272 833 Pfam Galactose binding lectin domain 755 832 IPR000922 GO:0030246
Mibi07g0272 833 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Mibi07g0272 833 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Mibi07g0272 833 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Mibi07g0272 833 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Mibi07g0272 833 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Mibi07g0272 833 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Mibi07g0272 833 PRINTS Glycosyl hydrolase family 35 signature 640 656 IPR001944 GO:0004553|GO:0005975
Mibi07g0272 833 PRINTS Glycosyl hydrolase family 35 signature 613 627 IPR001944 GO:0004553|GO:0005975
Mibi07g0272 833 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Mibi07g0272 833 Gene3D Glycosidases 20 342 - -
Mibi07g0272 833 Gene3D - 746 833 IPR043159 -
Mibi07g0272 833 Gene3D - 456 584 - -
Mibi07g0272 833 PANTHER BETA-GALACTOSIDASE RELATED 19 773 IPR001944 GO:0004553|GO:0005975
Mibi07g0272 833 Gene3D - 592 729 - -
Mibi07g0272 833 SUPERFAMILY (Trans)glycosidases 26 344 IPR017853 -
Mibi07g0272 833 FunFam Beta-galactosidase 744 833 - -
Mibi07g0272 833 FunFam Beta-galactosidase 590 729 - -
Mibi07g0272 833 FunFam Beta-galactosidase 22 343 - -
Mibi07g0272 833 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Mibi07g0272 833 ProSiteProfiles SUEL-type lectin domain profile. 747 833 IPR000922 GO:0030246
Mibi07g0272 833 SUPERFAMILY Galactose-binding domain-like 582 746 IPR008979 -
Mibi07g0272 833 FunFam Beta-galactosidase 292 419 - -
Mibi07g0272 833 Pfam Glycosyl hydrolases family 35 33 339 IPR031330 -
Mibi07g0272 833 Pfam Beta-sandwich domain in beta galactosidase 347 417 IPR041392 -
Mibi07g0272 833 SUPERFAMILY Galactose-binding domain-like 401 569 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0272 Mibi-ChrMibi07 3426717 3432686 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0272 23 690 Glycoside Hydrolase AT2G28470 74.704 0.0 1060