Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0271 ATGGCTTCCTCCAAAAATTCCAACACAGAACACAACAACAACGGACCTGCTGATACCTCCAAACCTTCGAAGAAAGCCGCCAATCCCAGAAAAGAGAATCACCTGGACGACAAGAAAGACAACAGTAATAAGAAGCAAAGACTTTACTACTATGATTCTGATGTCAATAAAAAGGAACATAAACCCATCCCTCTTCTTTCTTCCAGCACCGACTCCGATGAAGCATGCCTAGAGGAAGAGCGTCAAGAATACAAGACTGAGATCACAAATGGGCCAACCAGTTCAACCAAACCCAGCAACAAATACAAAGTCAAACGAATGAAACATGATGATGAAGATGAAGATGAAGATGAAGGGAAAGCAGACTCCAAAAACTATGTGATTCCCATGAATCGTGTCCGGACAATTAGTATGGACCAAGATGTTGACTTGCGTGTTTCCCAGGAAGCCATATTTGTCATCAGCAAAGCCACGGAGATGTTTCTTAAACAATTTACGCGAGACAGTCATGCTTCCTGTGTTGGGAATCGAAACAAATCTCTTGCTTACAAACACCTATCATCTGTTGTAAGCAATCATAGCAGATACGAGTTTCTATCTGATTTTGTTCCGAAGAAAATAAAAGCAGAAATTGCATTAAAGGAGAGAAATTCCGATGTGAACGGTGGTTAG 672 0.4122 MASSKNSNTEHNNNGPADTSKPSKKAANPRKENHLDDKKDNSNKKQRLYYYDSDVNKKEHKPIPLLSSSTDSDEACLEEERQEYKTEITNGPTSSTKPSNKYKVKRMKHDDEDEDEDEGKADSKNYVIPMNRVRTISMDQDVDLRVSQEAIFVISKATEMFLKQFTRDSHASCVGNRNKSLAYKHLSSVVSNHSRYEFLSDFVPKKIKAEIALKERNSDVNGG 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0271 223 MobiDBLite consensus disorder prediction 1 120 - -
Mibi07g0271 223 MobiDBLite consensus disorder prediction 24 61 - -
Mibi07g0271 223 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 128 190 IPR003958 -
Mibi07g0271 223 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 94 218 - -
Mibi07g0271 223 MobiDBLite consensus disorder prediction 1 21 - -
Mibi07g0271 223 Gene3D Histone, subunit A 80 205 IPR009072 GO:0046982
Mibi07g0271 223 SUPERFAMILY Histone-fold 145 206 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0271 Mibi-ChrMibi07 3419075 3420943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0271 112 189 CCAAT-HAP5 Transcription Factor Family AT1G07980 34.615 8.94e-13 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mibi07g0271 CBFD_NFYB_HMF 3e-09 CL0012