Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0264 ATGAATAACATGTCTGATGAACAAGCCCTCCCTCTTCCTTCCACCATAAAAACCTTCCTTCCAAATCCTCTCAAGAAGAAAAGAAATCTCCCAGGAACACCAGATCCAGATGCACAGGTGATAGCATTATCACCAAAGTCTTTGATGGCGACAAAACGTTTCGTGTGTGAGATATGCAAGAAAGGGTTTCAGAGAGACCAGAATTTGCAGCTGCACCGCCGTGGACATAACCTTCCGTGGAAGCTCCGGCAGAGAAGTGAGAAAGAAGTGGCGGCTACGAAGAAAGTGTATGTGTGCCCTGAAAAGACATGTGTCCACCATAATCCTTCAAGAGCACTGGGAGATCTCACTGGGATTAAGAAGCACTTTAGTAGAAAACATGGGGAGAAGAAGTGGAACTGCCATAAATGCTCCAAGAAATATGCTGTTCACTCTGACTGGAAGGCTCATCTTAAGATTTGTGGCACTAGAGAGTACAAATGCCACTGTGGCACTCTTTTCTCCAGGAAAGACAGCTTTGTGACGCATAGAGCTTTCTGTGATGTATTGGAGGAAGAAAGTGCCAGAAGAGTAAGCTTCGTTCCAGAAGAAGCATATAGAATCCCTCAGGTTTTTAATGGCTATCATGGAGGGCCTGATATGACCATGAAAACCATGAACATGCTTGCTTCTTCTTCCTCGTGGCTGAAACCATACCCAGAAGTAGCATCATTCGAAAGTTTAGCCAATCTGGCCATGTTTGGAACATCTCACATTATGAAGGAGGAAGAAGAAGGAGAGAAGAGAGGAGGGTTGTCATGTAGCGCAGGCTCTTTGTATTGTAGTAATCATGAAAACCAATTGCAGGTAGGCTTGTCTCAGCCTCATGGTCACATGTTATCACCATCCACTTCACTGTTAGAGAAAGTAAAGCAGATTGGATCTACAGGAATCAGCAACCATATCAACATCTTTGGCTTAATGGCTGGATCGTCCTTACCACTCTTTAACACCACCACGACGCCGTTTAATGATGGCGATCAGGCTGGACTATATTTCAATAATACAGCACATCCAACTGATCATACCTTGAACGACTTTGCGACATTATCACAAGGATTGGTATTGAATGATTCCAACTCGAGCCACTTTGAGAGAAGCGGCGAGAAATTACATCAAATGGAATTGGGTGGTTTAACTTTAACCAGAGATTTTCTAGGCGTCGGTGAAAATGAGCTAGACAAGTTTAATGCTGCTGATCAGCCATGGAGCTCCATTAGCCTCTGA 1266 0.4408 MNNMSDEQALPLPSTIKTFLPNPLKKKRNLPGTPDPDAQVIALSPKSLMATKRFVCEICKKGFQRDQNLQLHRRGHNLPWKLRQRSEKEVAATKKVYVCPEKTCVHHNPSRALGDLTGIKKHFSRKHGEKKWNCHKCSKKYAVHSDWKAHLKICGTREYKCHCGTLFSRKDSFVTHRAFCDVLEEESARRVSFVPEEAYRIPQVFNGYHGGPDMTMKTMNMLASSSSWLKPYPEVASFESLANLAMFGTSHIMKEEEEGEKRGGLSCSAGSLYCSNHENQLQVGLSQPHGHMLSPSTSLLEKVKQIGSTGISNHINIFGLMAGSSLPLFNTTTTPFNDGDQAGLYFNNTAHPTDHTLNDFATLSQGLVLNDSNSSHFERSGEKLHQMELGGLTLTRDFLGVGENELDKFNAADQPWSSISL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0264 421 ProSiteProfiles Zinc finger C2H2 type domain profile. 54 76 IPR013087 -
Mibi07g0264 421 SUPERFAMILY beta-beta-alpha zinc fingers 52 152 IPR036236 -
Mibi07g0264 421 ProSitePatterns Zinc finger C2H2 type domain signature. 56 76 IPR013087 -
Mibi07g0264 421 SMART c2h2final6 97 127 IPR013087 -
Mibi07g0264 421 SMART c2h2final6 132 152 IPR013087 -
Mibi07g0264 421 SMART c2h2final6 54 76 IPR013087 -
Mibi07g0264 421 Gene3D Classic Zinc Finger 51 77 - -
Mibi07g0264 421 Gene3D Classic Zinc Finger 89 180 - -
Mibi07g0264 421 FunFam protein indeterminate-domain 12-like 33 103 - -
Mibi07g0264 421 FunFam protein indeterminate-domain 5, chloroplastic-like 110 189 - -
Mibi07g0264 421 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 24 404 IPR031140 -
Mibi07g0264 421 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0264 Mibi-ChrMibi07 3394569 3396792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0264 25 199 IDZ Gene Family AT3G45260 80.000 3.95e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi07g0264 None None None