Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0252 ATGGAGTGCAATGATCCAATCCCAAACACCCCAAGTCCTACTTCTTCCTCTTTCCCTCTCTCAAACACTTCTTCTCCTCCATCTTCGCCTCCACAAGTAGTGGTGGTAAGTCCTTGTGCTGCTTGTAAGATTTTAAGGCGGCGATGTGCTGAAAAATGTGTTCTCGCTCCCTATTTTCCTCCTTCTGAACCCGCCAAGTTCACCATTGCTCACCGTGTCTTCGGCGCCAGCAATATCATCAAGTTCTTGCAGGAACTTCCTGAGTCACAAAGAGCTGATGCAGTGAGCAGTATGGTGTACGAGGCAAGTGCGAGAATAAGAGATCCAGTGTATGGATGTGCGGGTGCGATTTGTCATCTTCAGAAGCAAGTGAGTGACCTTCAAGCTCAGCTGGCTAAGGCTCAAGCCGAGCTTGTGAACATGCAATTGCAGCAAGCCAATCTGGTGGCTCTTCTCTGCATGGAAATGTCTCAAACTACGACTCAAAACGATCAGACTCGAACGACGACGTCTCCTACAAGTTGTACTCCTCCTCCTCAGGAATATTACTCTTCGCCGCCATCATCTTCTTCGTTTGAAGATACAAACTTCATTACTTCAAGCAACCTCAACTTCTTCGCGGAAAGCACTGGCCTTAACTCTTTATGGGAGCAGCCACTTTGGACATGA 669 0.4783 MECNDPIPNTPSPTSSSFPLSNTSSPPSSPPQVVVVSPCAACKILRRRCAEKCVLAPYFPPSEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICHLQKQVSDLQAQLAKAQAELVNMQLQQANLVALLCMEMSQTTTQNDQTRTTTSPTSCTPPPQEYYSSPPSSSSFEDTNFITSSNLNFFAESTGLNSLWEQPLWT 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0252 222 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 37 182 - -
Mibi07g0252 222 MobiDBLite consensus disorder prediction 1 30 - -
Mibi07g0252 222 MobiDBLite consensus disorder prediction 160 178 - -
Mibi07g0252 222 ProSiteProfiles LOB domain profile. 37 138 IPR004883 -
Mibi07g0252 222 MobiDBLite consensus disorder prediction 160 190 - -
Mibi07g0252 222 Coils Coil 124 144 - -
Mibi07g0252 222 Pfam Lateral organ boundaries (LOB) domain 38 135 IPR004883 -
Mibi07g0252 222 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0252 Mibi-ChrMibi07 3225425 3226701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0252 34 222 AS2 family AT1G07900 61.458 5.83e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi07g0252 LOB 2e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0135 01 1419861 1420569 Mibi07g0252 07 3225425 3226701 CCT
Mibi07g0252 07 3225425 3226701 Mibi07g0252 07 3225425 3226701 ECH