Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0249 ATGCTGCAAGCATTGTGTTCGGTTAAAGATGTGACTAAATTCATATGTGATGACACTTTTCTCGTGGTCAGGAAAACACGTGGTATGGGAGCTGCTGGCAAATTGAGGTCCCACCGGAGAAGGCAGAGTGGAATTGAGGCTAAGCAGCCAAACTCTGCCATTAGAAATTGTGCTCGAGTGCAGTTGATCAAGAATGGGAAGAATATTGGAGCCTTTGTGCTCAACGATGGACGAGGTGCTGATTGCTGGATTTGGTCGAAAAGGGCATGCTGTCGGAGATATTCCCGGAGTTTGATTCAAGGTTGTGAAGTCGTGGGAATTGGGAATGTAGAATCCACTATTACAACCCTTGAGAGTGAATCAAATGAGGCTGATGTACAAAACTACAAATCTGCATCCCTGGATTTTGCTGTTTCAGTAGTACTCTCTCACTGCCAGCTTTGA 444 0.4527 MLQALCSVKDVTKFICDDTFLVVRKTRGMGAAGKLRSHRRRQSGIEAKQPNSAIRNCARVQLIKNGKNIGAFVLNDGRGADCWIWSKRACCRRYSRSLIQGCEVVGIGNVESTITTLESESNEADVQNYKSASLDFAVSVVLSHCQL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0249 147 Pfam Ribosomal protein S12/S23 30 77 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mibi07g0249 147 SUPERFAMILY Nucleic acid-binding proteins 35 78 IPR012340 -
Mibi07g0249 147 Gene3D - 19 81 IPR012340 -
Mibi07g0249 147 ProSitePatterns Ribosomal protein S12 signature. 48 55 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mibi07g0249 147 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 42 77 IPR006032 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0249 Mibi-ChrMibi07 3195275 3196550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0249 44 77 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 88.235 3.66e-14 63.5