Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0248 ATGGATCCTTCTAGTGCACAACACCAGCAAATGTCTAGCCAATCATCACTGGAGAACATGTTGACATGTTCAAAGTCACAGAATCCTCAGGAGAGAAAGCCAAGACCTCAACCTGAACAAGCCCTGAAATGTCCAAGATGTGACTCAACCAACACCAAATTCTGTTACTACAACAATTACAGTCTCTCTCAGCCCAGATATTTCTGCAAATCTTGCAGGAGATATTGGACCAAAGGAGGAACCCTGAGAAATGTTCCAGTGGGTGGAGGGTGCAGGAAAAACAAAAGATCCTCGTCATCATCTTCATCATCAAAAAGGGTTCAAGATCACTCACTCGCACCCAATTCCAATCCCCTTATATCTACCCTCCCTGCATTATCATATGACCAAAATGACCTCAAGTTTGCACTAGCTAGACTCCAAAAACAATCTTGCGGCCAATTTGGCTTTAATCATAATGACCATGATTTTTCTGTCCACCTGGGAAATTCTCTTGGAAATATCTCTTCCATAAATAACTCTGGGTTTCTAGAAGCACTTCGTAGTGGATTCCTTGAAACACAGGCTAGTAGTAATAATCTTCAGAATTTGTACTACGGTTATGGAAATGGGGACTTGGGAGAGGTGGATAATGGTAGTAACAGTAATAATAACAATGCTTGTGGGATTAACGGGGAGATGAATATGCTTCCATATGATCAAGAAGTGAGTAATGCCACTAATACTCATCATCAAGCAGTCACTGTTAGTACCTTGAAGCAAGAAATCTGCAATAATGGCGGCGGCAGAGGACAAGGTGATACTAAGGTTTTGTGGGGTCTTCCATGGCAGCTTCATAATAATAATGGAGACACAAACATTATGGGTGAGATTGATTCAGGAAGAGCAAATTGGAATAGTCTCACGTCGTCATCTTGGCACGGGCTTCTTAACAGTCCCCTAATGTAA 948 0.4188 MDPSSAQHQQMSSQSSLENMLTCSKSQNPQERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSSSSSKRVQDHSLAPNSNPLISTLPALSYDQNDLKFALARLQKQSCGQFGFNHNDHDFSVHLGNSLGNISSINNSGFLEALRSGFLETQASSNNLQNLYYGYGNGDLGEVDNGSNSNNNNACGINGEMNMLPYDQEVSNATNTHHQAVTVSTLKQEICNNGGGRGQGDTKVLWGLPWQLHNNNGDTNIMGEIDSGRANWNSLTSSSWHGLLNSPLM 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0248 315 MobiDBLite consensus disorder prediction 87 116 - -
Mibi07g0248 315 ProSitePatterns Zinc finger Dof-type signature. 44 80 IPR003851 GO:0003677|GO:0006355
Mibi07g0248 315 MobiDBLite consensus disorder prediction 1 34 - -
Mibi07g0248 315 ProSiteProfiles Zinc finger Dof-type profile. 42 96 IPR003851 GO:0003677|GO:0006355
Mibi07g0248 315 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 211 IPR045174 GO:0003700|GO:0006355
Mibi07g0248 315 MobiDBLite consensus disorder prediction 1 43 - -
Mibi07g0248 315 Pfam Dof domain, zinc finger 40 96 IPR003851 GO:0003677|GO:0006355
Mibi07g0248 315 MobiDBLite consensus disorder prediction 93 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0248 Mibi-ChrMibi07 3191383 3193005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0248 40 315 C2C2-Dof Transcription Factor Family AT2G28510 41.869 6.67e-51 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi07g0248 zf-Dof 6.6e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0132 01 1399475 1400998 Mibi07g0248 07 3191383 3193005 CCT