Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0242 ATGGAGAGTATTCGACCTCGAGATGGGTTTCCTGACATTTACAGGAGGGAGGTGGGGTTGTCACATCCTCGCGATTTTGCTCGACGATTTTTAGCTTCCGAGGCCATAGTAAAGCAAATGAGTTTGTATGGGAAGTTAGATGGTCATGACGGGTGCGTAAATGCTGTGGAGTTTAACTCTACTGGTGATCTTCTCGTCTCTGGTTCTGATGACCAGCAAGTTATGTTTTGGAATTGGGCATCCAAAACTAAGTTGTTTGAATATCCTTCTGGTCACTCTGACAACATATTTCAGGCAAGAATTATGCCATTTTCTGACGACCGCAAAATAGTGACTTCTGCTGGTGATGGCGAGGTAAGGCTTGGCCATCTCTCAGAGGATGGTACGATAGAAACTACTATGTTGGGGAAGCACCAAGGTTCTGTATACAAGCTTGCTTTGGAGCCAGGAAGTCCTCACATACTGTATAGCTGTGGTGAAGATGGTTTTATTCAACATTTTGATCTGCGAAGTAGTTCTGCTACAAAACTTTTCCGTTGCTCCTCATTGACAGGGAATAATAAGCAAACTTCGAGCAGGATAAGGTTGAATTCAATTGTGATTGATTCAAGAAATCCAAATTACTTTGCGATTGGAGGATCAGATGAATATGCACGTGTTTATGACATTAGAAAATACCAATTGGATGCGACTAGTAATTCAGATACGCCTGTTAACACTTTTTGCCCTCTTCACTTAATTGGCTCAAATCATGTCCATATCACAGGATTGGCTTACTCAAGCCAGAGTGAGCTCCTCGTTTCTTATAATGATGAACTCATCTATTTATTTCAAAAGAATATGGGATTGGGTGGCTCACCTTCTGCTGCATCTGAGGAGTTAAATATACTTCAACAGGCGCGCGTTTACTCTGGTCATCGAAATGCACGGACAGTTAAAGGAGTGAGCTTCTTTGGCCCTAACGATGAATATGTTTTGAGTGGCTCAGATTGTGGTCATATTTTCATTTGGAAGAAGAAGGATGCTAAGCTGGTGAGATCAATGGTAGGTGATCAACAAGTTGTAAATCAACTTGAAGCTCACCCGCATATTCCCGTTCTTGCTACTTGCGGTATTGAAAATGATGTGAAAATATGGTCTCCTCAAGCTAGTGATACTCCTCCAGTTCCTGAAAATATAGAAGAGATAATGGAGGCAAACAGAAATGGGAGAGAAGATCGATCACGTGTAACTCTTACCCCTGATGTTGTTATGCATGTTCTGCGCTTGCAAAGGCGGCAGACATTGGCATATGTTGAAAGAAGTTACAGTAGAGCTGATATTTTTAGAGATGAAGAAGATTTGGAGGGCTACTTCTTCTGA 1362 0.4185 MESIRPRDGFPDIYRREVGLSHPRDFARRFLASEAIVKQMSLYGKLDGHDGCVNAVEFNSTGDLLVSGSDDQQVMFWNWASKTKLFEYPSGHSDNIFQARIMPFSDDRKIVTSAGDGEVRLGHLSEDGTIETTMLGKHQGSVYKLALEPGSPHILYSCGEDGFIQHFDLRSSSATKLFRCSSLTGNNKQTSSRIRLNSIVIDSRNPNYFAIGGSDEYARVYDIRKYQLDATSNSDTPVNTFCPLHLIGSNHVHITGLAYSSQSELLVSYNDELIYLFQKNMGLGGSPSAASEELNILQQARVYSGHRNARTVKGVSFFGPNDEYVLSGSDCGHIFIWKKKDAKLVRSMVGDQQVVNQLEAHPHIPVLATCGIENDVKIWSPQASDTPPVPENIEEIMEANRNGREDRSRVTLTPDVVMHVLRLQRRQTLAYVERSYSRADIFRDEEDLEGYFF 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0242 453 Pfam WD domain, G-beta repeat 44 78 IPR001680 GO:0005515
Mibi07g0242 453 Pfam WD domain, G-beta repeat 299 338 IPR001680 GO:0005515
Mibi07g0242 453 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 46 78 - -
Mibi07g0242 453 SMART WD40_4 39 78 IPR001680 GO:0005515
Mibi07g0242 453 SMART WD40_4 296 338 IPR001680 GO:0005515
Mibi07g0242 453 SMART WD40_4 176 222 IPR001680 GO:0005515
Mibi07g0242 453 SMART WD40_4 128 168 IPR001680 GO:0005515
Mibi07g0242 453 SMART WD40_4 341 380 IPR001680 GO:0005515
Mibi07g0242 453 SMART WD40_4 81 123 IPR001680 GO:0005515
Mibi07g0242 453 SMART WD40_4 240 278 IPR001680 GO:0005515
Mibi07g0242 453 Gene3D - 32 382 IPR015943 GO:0005515
Mibi07g0242 453 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 12 438 IPR045151 -
Mibi07g0242 453 SUPERFAMILY WD40 repeat-like 40 381 IPR036322 GO:0005515
Mibi07g0242 453 ProSiteProfiles Trp-Asp (WD) repeats profile. 46 87 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0242 Mibi-ChrMibi07 3117413 3119940 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0242 44 256 Eukaryotic Initiation Factors Gene Family AT2G46290 22.831 2.31e-06 47.8