Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0239 ATGGCAATATCTGGAACCGGTGATGGAAGCAACAGTGTAAGCCCTAGTTCTCTGAAGCTCCTTCATCCGTCAACTCTACTTCCGTTTTCACTCTATTTTTTCCAGAATCCATCGTCTGTAGCCGTTTTCTTCACATTACCTTCGGAGTCTGAGACAGCCATGTTAGATCTTAATCTTAATGTGGATTCGACCGATTTGACTCAGAATCATGACTCGGTCATGTTCTTTGACAAATTTCCTGACGCTTCGGCGAATCAAATGGCGGAATCGGGAACCTCTAATTCTTCTGTTGTCAATGCCGAGGGGTCCAGTACTGGAGGAGGCGACGACGACTCCTGCTCCACACGTGCCGGCGACGTAGTCACCTTCAATTTCGATATCCTCAAGGTGGACGGTGGTAACGGCTTCTCAACCAGAGAGTTATTTCCGGTGAGTGAAGCAAAAGGAGTGGATAGCGACTCTGGTATTTGGCAAGGGCAGTCTTCATCGCCTTTTCCATCAAATACGAGCTGGATGAATCTCTCATTCAGTGGTCAAGGTGGTGGCACAGAGGCGAAGATGATTCAACTTCAGCAACAGCCTCAGCCGCAGGCTAAGAAGAGCAGGAGAGGTCCAAGGTCTAGGAGCTCCCAATACAGAGGAGTTACCTTCTATAGGAGGACTGGAAGATGGGAATCGCATATCTGGGACTGTGGGAAACAAGTCTATTTAGGCGGTTTTGACACTGCACATGCCGCTGCTAGAGCCTATGATCGAGCTGCAATTAAATTCAGGGGAGTTGAAGCTGATATCAATTTCAATCTCAGTGATTATGAGGAGGATCTAAAACAGATGAAGAATCTCACCAAAGAAGAGTTTGTTCATATTCTTCGTCGCCAGAGTACCGGTTTCTCTAGGGGTAGCTCAAAATACCGGGGGGTAACTTTGCACAAATGTGGGCGCTGGGAAGCTCGGATGGGACAATTTCTTGGAAAAAAGTATATATACCTTGGGCTGTTCGACAGCGAAGTAGAAGCTGCAAGGGCTTACGATAAAGCAGCCATTAAGTGCAATGGAAGGGAGGCAGTAACTAACTTTGAGCCAAGTACTTATGAAGGGGAGTTGAACACTGAAGCGATCAATGAAGGTGTCAGTTACAATCTTGACCTCAATTTAGGCATAGCAACCCCAGGCAAAGGTTCCAGTGAAAGCAGGGGCAATCCTGAGCTCCAGTCTTATCCTTACAATATGCATGCCAGATCAAGTTCAAGGATAGAGACCAACACTAATTCGGTGATTGGCGATCAAGCTATGAAGAAGCTTGTAGTAAATGGAGATCGCCCTTCTGTTTGGAATGGCATATATCCAAATTTCTTTCCCAGTGAGGAAAGAGCAGAGAGAATGAGCACAGGAGTTCCAAGCTGGACGTGGCAAAGGCATGGCCAGCTAGGTGCTATCCAAGTTCCAGGATTCTCTACTGCAGCATCATCAGGATTCTCCATTTCATCATCATCAACATCAACATCATCCACTCCCATATTCTCCGCCATACCTATCAACTCACATCCCCTCACTCTATCCTTTTCTTCTTCATCCACTTCAGCTGCCCCCACAGCATCTCCATATTATTACCACATGAAGCACCCGTATTCACCACCCTAA 1641 0.4668 MAISGTGDGSNSVSPSSLKLLHPSTLLPFSLYFFQNPSSVAVFFTLPSESETAMLDLNLNVDSTDLTQNHDSVMFFDKFPDASANQMAESGTSNSSVVNAEGSSTGGGDDDSCSTRAGDVVTFNFDILKVDGGNGFSTRELFPVSEAKGVDSDSGIWQGQSSSPFPSNTSWMNLSFSGQGGGTEAKMIQLQQQPQPQAKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNLSDYEEDLKQMKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYEGELNTEAINEGVSYNLDLNLGIATPGKGSSESRGNPELQSYPYNMHARSSSRIETNTNSVIGDQAMKKLVVNGDRPSVWNGIYPNFFPSEERAERMSTGVPSWTWQRHGQLGAIQVPGFSTAASSGFSISSSSTSTSSTPIFSAIPINSHPLTLSFSSSSTSAAPTASPYYYHMKHPYSPP 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0239 546 CDD AP2 302 362 IPR001471 GO:0003700|GO:0006355
Mibi07g0239 546 PRINTS Ethylene responsive element binding protein signature 342 362 IPR001471 GO:0003700|GO:0006355
Mibi07g0239 546 PRINTS Ethylene responsive element binding protein signature 304 315 IPR001471 GO:0003700|GO:0006355
Mibi07g0239 546 MobiDBLite consensus disorder prediction 86 111 - -
Mibi07g0239 546 MobiDBLite consensus disorder prediction 149 170 - -
Mibi07g0239 546 CDD AP2 211 269 IPR001471 GO:0003700|GO:0006355
Mibi07g0239 546 SUPERFAMILY DNA-binding domain 302 361 IPR016177 GO:0003677
Mibi07g0239 546 MobiDBLite consensus disorder prediction 86 113 - -
Mibi07g0239 546 Gene3D AP2/ERF domain 210 268 IPR036955 GO:0003700|GO:0006355
Mibi07g0239 546 Gene3D AP2/ERF domain 302 361 IPR036955 GO:0003700|GO:0006355
Mibi07g0239 546 SMART rav1_2 211 273 IPR001471 GO:0003700|GO:0006355
Mibi07g0239 546 SMART rav1_2 303 366 IPR001471 GO:0003700|GO:0006355
Mibi07g0239 546 MobiDBLite consensus disorder prediction 154 170 - -
Mibi07g0239 546 FunFam AP2-like ethylene-responsive transcription factor 302 362 - -
Mibi07g0239 546 ProSiteProfiles AP2/ERF domain profile. 211 267 IPR001471 GO:0003700|GO:0006355
Mibi07g0239 546 FunFam AP2-like ethylene-responsive transcription factor 210 269 - -
Mibi07g0239 546 MobiDBLite consensus disorder prediction 189 212 - -
Mibi07g0239 546 SUPERFAMILY DNA-binding domain 210 268 IPR016177 GO:0003677
Mibi07g0239 546 Pfam AP2 domain 302 352 IPR001471 GO:0003700|GO:0006355
Mibi07g0239 546 Pfam AP2 domain 211 259 IPR001471 GO:0003700|GO:0006355
Mibi07g0239 546 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 176 442 - -
Mibi07g0239 546 ProSiteProfiles AP2/ERF domain profile. 303 360 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0239 Mibi-ChrMibi07 3076158 3080231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0239 126 396 AP2-EREBP Transcription Factor Family AT4G36920 64.286 1.76e-101 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi07g0239 AP2 3.4e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0126 01 1328790 1332278 Mibi07g0239 07 3076158 3080231 CCT