Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0228 ATGAACTGTGCAGGACCAGCAAGGTGCTACAGGCAAATTAAAAACAAACCCTACCCAAAATCACGCTTCTGCCGTGGTGTTCCTGATCCTAAGATCAGAATTTATGATGTTGGGATGAAAAAGAAAGGTGTTGATGAGTTCCCTTTCTGCGTTCATCTTGTTAGCTGGGAGAAAGAAAACGTTTCAAGTGAGGCACTGGAAGCTGCTAGGATTGCATGCAACAAATACATGGCTAAATTCGCCGGAAAGGACGCATTCCACCTGAGAGTTAGGGTGCATCCGTTCCATGTTCTTAGGATTAACAAGATGCTCTCATGTGCTGGAGCTGATAGGCTCCAAACTGGAATGAGAGGTGCATTTGGAAAGCCTCAAGGAACATGCGCTAGAGTGGCCATTGGACAGGTCCTCCTCTCTGTTCGCTGCAAGGACCCCAATGGTGTTCATGCCCAGGAAGCCCTTCGTCGCGCCAAGTTCAAGTTTCCTGGCCGCCAAAAGATCATTGTTAGCAGAAAATGGGGCTTCACCAAGTTTAACCGCAATGACTATTTGAGGTTCAAGTCTGAGAACAGGATCATGCCTGATGGTGTAAATGCCAAGCTTCTTGGATGCCATGGACCTTTGGCTAACCGTCAGCCTGGAAGAGCCTTTCTGGAAGCAACTTCTTAG 666 0.476 MNCAGPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDPNGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRNDYLRFKSENRIMPDGVNAKLLGCHGPLANRQPGRAFLEATS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0228 221 CDD Ribosomal_L16_L10e 42 167 IPR016180 GO:0003735|GO:0005840|GO:0006412
Mibi07g0228 221 SUPERFAMILY Ribosomal protein L16p/L10e 6 174 IPR036920 GO:0003735|GO:0005840|GO:0006412
Mibi07g0228 221 TIGRFAM uL16_euk_arch: ribosomal protein uL16 5 175 IPR001197 GO:0003735|GO:0005840|GO:0006412
Mibi07g0228 221 ProSitePatterns Ribosomal protein L10e signature. 109 130 IPR018255 GO:0003735|GO:0005840|GO:0006412
Mibi07g0228 221 PANTHER 60S RIBOSOMAL PROTEIN L10 6 214 IPR001197 GO:0003735|GO:0005840|GO:0006412
Mibi07g0228 221 FunFam 60S ribosomal protein L10 2 207 - -
Mibi07g0228 221 PIRSF RPL10a_RPL10e 3 183 IPR001197 GO:0003735|GO:0005840|GO:0006412
Mibi07g0228 221 Pfam Ribosomal protein L16p/L10e 13 167 IPR016180 GO:0003735|GO:0005840|GO:0006412
Mibi07g0228 221 Gene3D Ribosomal protein L10e/L16 4 218 IPR036920 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0228 Mibi-ChrMibi07 2895590 2896986 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0228 6 221 Cytoplasmic Ribosomal Protein Gene Family AT1G66580 87.963 1.42e-143 398