Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0223 ATGGGTTGTTTTCTCTGCCCTCGTGAGCCAACCCAACAACACCACCATCATAATCATCACAAGCCTTCCTCCAATATTGATCATCACAATTCCAGAAGCCTTCCTCGTAATTCCGATAAGTCCTCCCACCATCATCGCCCTCTTTCATCAGATAAGCTTAAAGAAGATACACCGAACGTGACTAATAATGTGAAGAAGGAAGATCAAGTTGTTTCTTCTTGCAACCCTCCTGCTGATAATAATGCACCACTCTCTCCTCAGCTTAAGGCCTTGAATTTAGAAGCCCAAATCCAGAAGGACGAAAAAGTTGTAGTAAATGATATGACTCGTGCCAAATCGTTCTCCTTTGATGAGCTAGCAGATGCGACCGGTCATTTCAGGTCAAGTTGCTTGTTGGGCGAAGGAGGTTTTGGCAAAGTTTATAAGGGATACTTAAAGAGAACAAAGCAGGTGGCAGCTATAAAGCAACTGGATCGGAATGGACATCAAGGGAAGAGGGAATTTGTGGTGGAAGTGTTGACACTAAGTCTTGCAGACCACCCTAATCTGGTCAAACTCTTGGGGTTCTGTGCCATGGGATATCAGAGATTGTTGGTTTATGAGTACATGCCTTTGGGATCCCTCGAGCATCATCTTTATGAACTTCCAGCAGGCAGAAAAGCACTGGATTGGAACACGAGAATGAAGATAGCGGCAGGAACAGCGAGGGGTTTGGAATATTTGCATGATAAGATGAAGCCTCCAGTGATATACAGGGACCTGAAATGTTCCAACATATTGTTAGGAGAGGGATATCATCCAAAGTTGTCTGATTTTGGGTTGGCAAAAGTAGGTCCAAGTGGAGAAGACACACATGTTTCAACAAGGGTCATGGGCACATATGGGTATTGTGCCCCGGAATATGCCATGACTGGTCAATTAACTTTTAAGTCCGACATTTACAGCTTCGGTGTTGTTCTTTTGGAGCTCTTAACCGGCCAACAAGCTTTTGACAAGTCGAGGCCTCCCAAACAACAAAATCTCGTCACTTGGGCAAGGCCAAAATTCAAGGACAGGAAAAGATTCTCAGAAATGGCGGATCCATCACTTGAAGGTCAATATCCAGTGAGAGGACTGTACCAAGCTCTTGCCATTGCAGCCATGTGTGTGCAAGAGAAGCCTCATATGAGACCTGCTATTGCTGATGTTGTCACTGCCCTCAACTTCCTGGCTTCCCAGAAATATGATCCGAACCTTCAAATTCAACACAAATCCAAATCCAAGAGCCTTCCTCCACTCACAAATCATCCTGCTCTTCTTGGTGCTAGTCTATCTGACTCATCATCATCAGACGGATCTGGCACCCAGCAACACCATTCTGGGACAGATCGATCTGACAATTCTGAGTCAGACAGGTCTGGGAACGAAGAAAACTATTGA 1419 0.4496 MGCFLCPREPTQQHHHHNHHKPSSNIDHHNSRSLPRNSDKSSHHHRPLSSDKLKEDTPNVTNNVKKEDQVVSSCNPPADNNAPLSPQLKALNLEAQIQKDEKVVVNDMTRAKSFSFDELADATGHFRSSCLLGEGGFGKVYKGYLKRTKQVAAIKQLDRNGHQGKREFVVEVLTLSLADHPNLVKLLGFCAMGYQRLLVYEYMPLGSLEHHLYELPAGRKALDWNTRMKIAAGTARGLEYLHDKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGEDTHVSTRVMGTYGYCAPEYAMTGQLTFKSDIYSFGVVLLELLTGQQAFDKSRPPKQQNLVTWARPKFKDRKRFSEMADPSLEGQYPVRGLYQALAIAAMCVQEKPHMRPAIADVVTALNFLASQKYDPNLQIQHKSKSKSLPPLTNHPALLGASLSDSSSSDGSGTQQHHSGTDRSDNSESDRSGNEENY 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0223 472 Pfam Protein kinase domain 131 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0223 472 MobiDBLite consensus disorder prediction 455 472 - -
Mibi07g0223 472 ProSiteProfiles Protein kinase domain profile. 126 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0223 472 PANTHER OS07G0668900 PROTEIN 24 411 - -
Mibi07g0223 472 SMART serkin_6 126 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0223 472 FunFam Serine/threonine-protein kinase PBS1 203 419 - -
Mibi07g0223 472 Gene3D Transferase(Phosphotransferase) domain 1 203 422 - -
Mibi07g0223 472 Gene3D Phosphorylase Kinase; domain 1 94 202 - -
Mibi07g0223 472 SUPERFAMILY Protein kinase-like (PK-like) 112 420 IPR011009 -
Mibi07g0223 472 MobiDBLite consensus disorder prediction 24 59 - -
Mibi07g0223 472 FunFam probable serine/threonine-protein kinase RLCKVII 97 202 - -
Mibi07g0223 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Mibi07g0223 472 MobiDBLite consensus disorder prediction 415 472 - -
Mibi07g0223 472 CDD STKc_IRAK 132 401 - -
Mibi07g0223 472 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Mibi07g0223 472 MobiDBLite consensus disorder prediction 9 59 - -
Mibi07g0223 472 MobiDBLite consensus disorder prediction 433 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0223 Mibi-ChrMibi07 2842551 2845686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0223 79 405 Glycoside Hydrolase AT3G07070 60.550 3.00e-142 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mibi07g0223 Pkinase 3.2e-46 CL0016