Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0193 ATGTCTTCCAATTCGGGTACGCAAGAGGATAAATCTCTGTATTGGGAAGGACACGGGGCATCCTCAATAATCGTATTCTGTGTCATATTCATCATAGTAACTTTATACTGCATAATTCAATGCTACTTGTATAGAGGCCCTCGCACTAGTTCCTCTAGAAACCAGGCTTCAAGGGGAGATTTGAACGAGCCCACCAATCCTGATGATAATGATCATAATCATCATCATCCTACACAGATTCAAGGTCGTGGATTAGATTTGTGGGCCATATCTTCTCTTCCAACGTCTCAGTTCAAGAAGAATGAAGGAAGTCACAAAGAGTGTGCGATATGCTTGGCAGAGTTTGAGGAACAAGAATGGGTCAAGAGACTTCCTAGCTGTGCCCATGTCTTTCATGTTTCCTGCATAACCACTTGGTTTCAGAATCACACAAATTGTCCCATCTGCAGAGCTACTGTTAATGTCAATGAAGATCATCATCTCGTTCTTACCCTGGACTCCTCTGTTTCCAACTATACATCACCAACCGAAGTGTTAAGCAGAGAAAACTTTTCGCCAGAAAGGCCTTCACATGTCGGCCGTCACGCAACAAAAATACAACCCATCTCATGTTCCAATTGA 621 0.4283 MSSNSGTQEDKSLYWEGHGASSIIVFCVIFIIVTLYCIIQCYLYRGPRTSSSRNQASRGDLNEPTNPDDNDHNHHHPTQIQGRGLDLWAISSLPTSQFKKNEGSHKECAICLAEFEEQEWVKRLPSCAHVFHVSCITTWFQNHTNCPICRATVNVNEDHHLVLTLDSSVSNYTSPTEVLSRENFSPERPSHVGRHATKIQPISCSN 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0193 206 MobiDBLite consensus disorder prediction 64 79 - -
Mibi07g0193 206 CDD RING-H2_PA-TM-RING 107 150 - -
Mibi07g0193 206 Pfam Ring finger domain 106 150 IPR001841 -
Mibi07g0193 206 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 159 IPR013083 -
Mibi07g0193 206 MobiDBLite consensus disorder prediction 49 63 - -
Mibi07g0193 206 MobiDBLite consensus disorder prediction 49 79 - -
Mibi07g0193 206 PANTHER RING-H2 FINGER PROTEIN ATL16 19 169 IPR044600 GO:0016567|GO:0016740
Mibi07g0193 206 SMART ring_2 108 149 IPR001841 -
Mibi07g0193 206 SUPERFAMILY RING/U-box 101 156 - -
Mibi07g0193 206 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0193 Mibi-ChrMibi07 2558236 2558856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0193 23 153 C3H Transcription Factor Family AT5G17600 36.029 1.57e-21 89.0