Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0190 ATGGTTCAACAAGAAATGAGGAAAGGTCCATGGACGGAACAGGAGGACATAAAACTGGTGTCCTTTGTGGGCTTATTTGGAGATCGAAGATGGGATTTTATTGCAAAGGTTTCAGGTTTGAAGGTGGCGGGAGATCACAAAAAATGGTTATTAGGGCTTGCTGGAACAGGTAAGAGTTGCCGGTTACGTTGGGTTAATTACCTTCATCCTGGCCTCAAAAGGGGGAAAATGACCCCCCAAGAAGAACGTCTCGTCCTCGAGCTTCACTCTAAATGGGGAAATAGATGGTCAAGAATTGCTCGAAAATTACCGGGACGCACTGATAACGAGATTAAGAATTATTGGAGAACTTACATGAGGAAGATGGCTCAAGAGAAAAAGCGAGCAGTGGCTGCTTTATCTCCTTCTTCATCAGGAATATCATCTTCCAAGAACAGTACTAGTGGAGAAGAAAGCTTTTATGATACAGGAGGGCCTAATAGTAACAAGAAATCTTCTTCCAAAGCGATAAAGATAGTAGGGCAAGATGAAGCATGTGAAGAAGAAGGGTACTCTATGGATGATATATGGAAAGATATTGAAGTGTCAGAAGAGAATAATAACAGTGAAGATGGCTGCAACTTCTCTTTATTTCCTTCATGGGAGTACTCTACTACTTCTGACTCGTTATGGGTCATGGATGAAGAGGAAAGTAAGATTTTTGACCCATTTTTTCCCTGCTTCGAACAAGGGACAACATTTATCACAATGCCTCGTCTTTCCTCTCTCTATCTTCTTTCTTACAATTCTCTTCAAGCTATCGGATGGACCTTTCCCCTCATTTCAATTTTGACAAATCTTCTCGTCACTCGCTCTGTCGCCGGAACCTATGCTTCTTCCGGCAAGCTAATAGGTTTTCTGCAATGCAGTGCAGTCTTGGAAGTCATACATGGAGCCATTGGCATTGTGCCAAGTGGAGTGTTACTCACTCTAATGCAATGGGGAGGAAGGGTCCACTTTCTGTTGGCGGTTGTTGACAAAATTGACGAGGTCCAGGAATCGCCGTCAGTCTTTATCACTTTCCTTGCATGGAGCATAAGTGAGGTAATTAGATATTCACATTATGCTTTCAACTGCATTGGAGATTGTCCTTCTTGGATCACCTATCTCAGGTACACCGCATTTATTGTGCTGTATCCATTAGGGATTGGTCCTGGTGAAATGTGGCTCATGTATCAAGCACTTCCTATTATTAAGAAGAGGAACCTCTATGCAGATGCCTTTTCAGGTCTCCCATTCAGTTATTATGATTTCCTCAGGGCTGTACTTGCATTGTATCCATTCCTCTGGTTGAAGCTTTATCTGCATTTGTTCAAGCAAAGGAAATCAAAACTCCGAAAAACCCATGAGAAGAAAAGAACGTGA 1404 0.4238 MVQQEMRKGPWTEQEDIKLVSFVGLFGDRRWDFIAKVSGLKVAGDHKKWLLGLAGTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTYMRKMAQEKKRAVAALSPSSSGISSSKNSTSGEESFYDTGGPNSNKKSSSKAIKIVGQDEACEEEGYSMDDIWKDIEVSEENNNSEDGCNFSLFPSWEYSTTSDSLWVMDEEESKIFDPFFPCFEQGTTFITMPRLSSLYLLSYNSLQAIGWTFPLISILTNLLVTRSVAGTYASSGKLIGFLQCSAVLEVIHGAIGIVPSGVLLTLMQWGGRVHFLLAVVDKIDEVQESPSVFITFLAWSISEVIRYSHYAFNCIGDCPSWITYLRYTAFIVLYPLGIGPGEMWLMYQALPIIKKRNLYADAFSGLPFSYYDFLRAVLALYPFLWLKLYLHLFKQRKSKLRKTHEKKRT 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0190 467 MobiDBLite consensus disorder prediction 130 169 - -
Mibi07g0190 467 FunFam MYB transcription factor 76 144 - -
Mibi07g0190 467 CDD SANT 76 119 IPR001005 -
Mibi07g0190 467 MobiDBLite consensus disorder prediction 134 169 - -
Mibi07g0190 467 ProSiteProfiles Myb-like domain profile. 3 68 IPR001005 -
Mibi07g0190 467 Pfam Protein tyrosine phosphatase-like protein, PTPLA 301 460 IPR007482 -
Mibi07g0190 467 SMART sant 73 121 IPR001005 -
Mibi07g0190 467 SMART sant 7 70 IPR001005 -
Mibi07g0190 467 Pfam Myb-like DNA-binding domain 8 68 IPR001005 -
Mibi07g0190 467 Pfam Myb-like DNA-binding domain 74 118 IPR001005 -
Mibi07g0190 467 SUPERFAMILY Homeodomain-like 5 115 IPR009057 -
Mibi07g0190 467 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Mibi07g0190 467 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 68 IPR017930 -
Mibi07g0190 467 Gene3D - 77 122 - -
Mibi07g0190 467 PANTHER VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE 218 461 IPR007482 -
Mibi07g0190 467 CDD SANT 10 68 IPR001005 -
Mibi07g0190 467 Gene3D - 8 73 - -
Mibi07g0190 467 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0190 Mibi-ChrMibi07 2498307 2503906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0190 1 245 MYB Transcription Factor Family AT5G59780 55.212 1.36e-79 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi07g0190 PTPLA 2.2e-50 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0190 07 2498307 2503906 Mibi07g0190 07 2498307 2503906 ECH