Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0181 ATGTCTGCCGCTCTTGATATGACCCTCGACGATATCATAAAGAAAAACAAAAAATCTGGATCTGCCAACTCCAGAGGTCGTGGCCGAGGATCTGGTCCAGGTCCTGCTCGCCGCTTTCCTAATCGTGCCGCCAATCGTGCTGCGCCATATGCAACCGCTAAGGCACCGGAGGCGACATGGCAGCATGATATGTTTGCGGATCAGGCTATGGCGTCGCACGCAGCTCAAGGTGGTCGAGCGTCTGCCATAGAAACGGGGACGAAGCTCTACATATCTAATTTGGATTACGGTGTTTCTAACGAGGATATTAAGGAGTTGTTTTCTGAGGTCGGTGACCTAAAACGGTATGCAATCCATTATGACAGGAGTGGCAGATCAAAGGGTACCGCAGAAGTAGTCTTTTCACGACGGGTTGATGCTGTAGCTGCTGTGAAGAGATACAACAATGTACAACTTGACGGTAAACCGATGAAGATAGAGATTGTGGGGACAAACATTGCTACACCTGCTGCAGCTCCTGCTGCAAATGGTGCTGTTGGAAATTCAAATGGCGTTCCTAGAATTGGACAAGGTAGAGGTGGGGCTTTCGGAAGGCCACGTGGTGGAGGTAGAGGACGTGTCTCCCAGAGGGGTCGAGGACGTGGAAGAGGTCGTGGAGAGAAGGTGTCTGCAGAAGATCTTGATGCTGAATTGGAGAAGTATCATTCAGAGGCAATGGAAATAAATTGA 729 0.4979 MSAALDMTLDDIIKKNKKSGSANSRGRGRGSGPGPARRFPNRAANRAAPYATAKAPEATWQHDMFADQAMASHAAQGGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYAIHYDRSGRSKGTAEVVFSRRVDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAAPAANGAVGNSNGVPRIGQGRGGAFGRPRGGGRGRVSQRGRGRGRGRGEKVSAEDLDAELEKYHSEAMEIN 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0181 242 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 89 157 IPR000504 GO:0003723
Mibi07g0181 242 Coils Coil 224 242 - -
Mibi07g0181 242 FunFam THO complex subunit 4 80 224 - -
Mibi07g0181 242 MobiDBLite consensus disorder prediction 213 242 - -
Mibi07g0181 242 Gene3D - 62 225 IPR012677 -
Mibi07g0181 242 SMART FoP_duplication_2 169 242 IPR025715 -
Mibi07g0181 242 MobiDBLite consensus disorder prediction 182 242 - -
Mibi07g0181 242 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 87 164 IPR000504 GO:0003723
Mibi07g0181 242 CDD RRM_THOC4 87 161 - -
Mibi07g0181 242 SUPERFAMILY RNA-binding domain, RBD 26 161 IPR035979 GO:0003676
Mibi07g0181 242 SMART rrm1_1 88 160 IPR000504 GO:0003723
Mibi07g0181 242 MobiDBLite consensus disorder prediction 1 53 - -
Mibi07g0181 242 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 5 240 - -
Mibi07g0181 242 Pfam C-terminal duplication domain of Friend of PRMT1 189 236 IPR025715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0181 Mibi-ChrMibi07 2402167 2405163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0181 86 161 Eukaryotic Initiation Factors Gene Family AT2G23350 35.526 4.25e-09 54.7