Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0164 ATGGTTTTCTCTTCTATTCCAGTCTATTTAGATCCTCCCAATTGGCAGCCGCAACAAAATCATCATCATCATCATCATCAACCATCAAATGGAAATGAAAACACTCAGCTCCTTCCTCATGCCGGAGGTTGCGGTGCTGGGTCGGCCCGGCCCGGTTCGATGGCCGACCGGGCCCGGCTAGCGAAGCTGCCACCGCCTGAGGCAGCCCTAAAGTGTCCACGTTGTGACTCCACCAACACCAAATTTTGCTACTTCAACAACTACAGCCTGTCTCAGCCACGTCACTTCTGCAAGACTTGCCGGCGATACTGGACTAGAGGCGGCGCTCTCCGGAACGTCCCCGTCGGAGGCGGTTGCCGGAGAAACAACAAGAAGAGCAAAAGGAGCCGATCAAAGTCTCCGGCCTCCGCGGGCCCCACATCCACCGACGACAACAACAAGCATGCACTCCTCCCTGGCACCGCCACCGGTGCAATCCCCTCCGGCGGTGCCACCGCCACGGAGCTGATGGGTCAGTTGCAACAACCTCCCAACTTGCCATTCATGGCTTCTTTACAAAACCTGGGTGCTGGCCGTTATGGCTTAGGGAACATGGGCCTGAGCTTGAGGGACATTATAGCCCAGAATGAGCCCATGGGCTTTCAAATTGGAGGAGGAGTAGTAGATAATCAGTGGAGGTCACAGCAATTCCCTAATTTCTTGAATGGGTTTGAGTCTAATAATTCAGTTGACTCTTCTTCATACCACCACCAGTTTCAAAGTGAGGGCATGCCAGTGATGGGAGATTCAGGTTCTAGGGTTACAACTCAGATGATCCCACCTGTTAAAATGGAAGACAGTGGAGCCCTAAATTTGTCAAGACCAGCCATAGGTAATAATAATAATAATAATAATAATCAGTACTATTCTTGGACTGATTTATCTGGTCTTGCATCTTCTTCCACTGGCCACCTCTTATAA 960 0.5094 MVFSSIPVYLDPPNWQPQQNHHHHHHQPSNGNENTQLLPHAGGCGAGSARPGSMADRARLAKLPPPEAALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNNKKSKRSRSKSPASAGPTSTDDNNKHALLPGTATGAIPSGGATATELMGQLQQPPNLPFMASLQNLGAGRYGLGNMGLSLRDIIAQNEPMGFQIGGGVVDNQWRSQQFPNFLNGFESNNSVDSSSYHHQFQSEGMPVMGDSGSRVTTQMIPPVKMEDSGALNLSRPAIGNNNNNNNNQYYSWTDLSGLASSSTGHLL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0164 319 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 41 244 IPR045174 GO:0003700|GO:0006355
Mibi07g0164 319 MobiDBLite consensus disorder prediction 114 163 - -
Mibi07g0164 319 MobiDBLite consensus disorder prediction 132 149 - -
Mibi07g0164 319 Pfam Dof domain, zinc finger 69 124 IPR003851 GO:0003677|GO:0006355
Mibi07g0164 319 ProSitePatterns Zinc finger Dof-type signature. 72 108 IPR003851 GO:0003677|GO:0006355
Mibi07g0164 319 MobiDBLite consensus disorder prediction 13 53 - -
Mibi07g0164 319 ProSiteProfiles Zinc finger Dof-type profile. 70 124 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0164 Mibi-ChrMibi07 2277692 2278888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0164 8 318 C2C2-Dof Transcription Factor Family AT3G55370 40.237 1.78e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi07g0164 zf-Dof 4e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0098 01 1027608 1028339 Mibi07g0164 07 2277692 2278888 CCT