Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0156 ATGGGAAATTGTTTGGGCACTCAAATCAAAGCTGAGAGCCTGTATAACGCAGGGTTGAATTCAAAACAAGTGATCATAGATGGAAGTGATGTGAGCAGCAGGGAAAGTGAGGTCTCAAAAATATCGGCCACTCATACTCGTAGGAGTGAGGGTGAGATCTTACAGTTATCCAATTTGAAGAGCTTTTCTTATGCAGAACTGAAAGCAGCCACACGGAATTTCAGACATGATAGTGTTTTAGGAGAAGGTGGCTTTGGCTCTGTTTTCAAAGGGTGGATTGATGAGCGGTCCCTTACTGCTGCCAAGCCTGGCAATGGGATTATCATTGCCGTCAAAAGACTTAAGCAAGATAGTATGCAAGGTCACAGTGAGTGGTTGGCTGAAGTGAATTTTCTGGGACAATTTTCTCATCCCCATCTTGTGAAGTTGATCGGGTATTGCCTTGAAGATGAACACCGCCTTCTGGTGTATGAATTTATGCCTCGAGGCAGCCTGGAGAATCATTTATTCAGGAGGGGCTCTTATTTTCAACCTCTCTCTTGGAACCTCCGTTTGAAAGTTGCCCTTGGTGCTGCCAGAGGACTTGCATTTCTTCACAGTGCTGAAACAAAAGTGATATATAGGGACCTGAAGACCTCAAATATCTTGCTTGATACCAATTACAATCCAAAACTTTCTGATTTTGGGTTGGCCAAGGATGGACCAGCAGAGGACAAAAGTCATGTCTCTACTAGAGTATTAGGAACATACGGATATGCAGCTCCAGAATATGTAGCCACCGGTCACCTGACTGCAAAGAGTGATGTTTATAGTTTCGGAGTAGTACTGGTTGAAATGTTATCAGGTCGGCGAGCAATGGACAAAAATCGACCATCGGGACAACGCAACTTGATCGAGTGGGCAAAACCATATCTAGCAAATAAACGTAAGCTTCTGCGTGTGATGGATACTCGTCTTGAAGGTCAGTATACGATAGATGATGCCTACAACGCAGCTATACTGGCATTGCGATGCATTTCAATAGAATCCAAGTTGAGGCCAACCATGGAGGAGGTTGTTTCTGCATTGGAACAGCTTCAAGTTTGCAATGGTGTTAATGGAGGAAAACAAAAGCCAACTGTGGATAGATCAAGTCGCAGAAAAAGTGAAGGTGACGCAAAGAATGTGAAGACCACCACAGCTTATCCCCGTCCATCTGCTTCCTCCCTCTATGCTTGA 1218 0.4433 MGNCLGTQIKAESLYNAGLNSKQVIIDGSDVSSRESEVSKISATHTRRSEGEILQLSNLKSFSYAELKAATRNFRHDSVLGEGGFGSVFKGWIDERSLTAAKPGNGIIIAVKRLKQDSMQGHSEWLAEVNFLGQFSHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWNLRLKVALGAARGLAFLHSAETKVIYRDLKTSNILLDTNYNPKLSDFGLAKDGPAEDKSHVSTRVLGTYGYAAPEYVATGHLTAKSDVYSFGVVLVEMLSGRRAMDKNRPSGQRNLIEWAKPYLANKRKLLRVMDTRLEGQYTIDDAYNAAILALRCISIESKLRPTMEEVVSALEQLQVCNGVNGGKQKPTVDRSSRRKSEGDAKNVKTTTAYPRPSASSLYA 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0156 405 SMART serkin_6 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0156 405 PANTHER OS01G0588500 PROTEIN-RELATED 43 360 - -
Mibi07g0156 405 MobiDBLite consensus disorder prediction 388 405 - -
Mibi07g0156 405 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0156 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Mibi07g0156 405 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
Mibi07g0156 405 MobiDBLite consensus disorder prediction 366 405 - -
Mibi07g0156 405 CDD STKc_IRAK 80 359 - -
Mibi07g0156 405 MobiDBLite consensus disorder prediction 373 387 - -
Mibi07g0156 405 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Mibi07g0156 405 SUPERFAMILY Protein kinase-like (PK-like) 51 360 IPR011009 -
Mibi07g0156 405 Pfam Protein tyrosine and serine/threonine kinase 77 355 IPR001245 GO:0004672|GO:0006468
Mibi07g0156 405 FunFam Probable serine/threonine-protein kinase PBL8 160 376 - -
Mibi07g0156 405 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Mibi07g0156 405 Gene3D Transferase(Phosphotransferase) domain 1 160 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0156 Mibi-ChrMibi07 2196532 2198482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0156 60 356 Glycoside Hydrolase AT3G07070 50.000 2.57e-102 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi07g0156 PK_Tyr_Ser-Thr 3.9e-46 CL0016