Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0153 ATGAGACTGCCCATATCAGACAGGGAAGGAGACGTGGAGGGTTATGATTGGGCCACGTACCCCACATATGAGAAGAGCGAGGACAGTTTTAATCTTGTGCTTAGGCCATGGATGAGGCAAGTGTGTGTGGGAATGGGAAGAGTACCCCCACCCACTGCCATTTCCCTCCACATCTTCTTCACTCTTCCCTCTTCCCTCTTCCCTCTTCACTCACTATCACTATTCACCATGGCTCTCCCCATTCTGCTCTGCATTGCCTCCCTCATCTCATTCCTCTACCAAATCGAAGCCAGACTCCCTGGTGTTTACACTGGTGGTGCTTGGGAATCTGCTCATGCCACTTTCTATGGAGGATCCGATGCTTCTGGCACTATGGGTGGAGCTTGTGGGTATGGTAATCTATACAGCCAAGGGTACGGAGTGAACACGGCGGCGTTAAGCACAGCACTGTTCAACAGTGGATTCAGCTGCGGTGCTTGCTTTGAGATTAAGTGTGCAAACGACAAACAATGGTGTCACTCTGGAAGCCCATCTATCTTCATCACTGCCACTAACTTCTGCCCACCAAACTTTGCTCTTCCCAACGACAATGGCGGCTGGTGTAACCCTCCTCGTCCTCACTTCGATCTTGCCATGCCTATGTTCCTCAAAATCGCCGAATACCGCGCCGGCATTGTCCCCGTCGCTTACCGCAGGGTGCCATGCAGGAAGAGAGGAGGGATAAGGTTCACCATTAATGGGTTTAGGTACTTCAATTTGGTTCTGATCAGCAACGTTGCGGGTGCAGGGGATGTGGTGAGGACGTATGTGAAGGGGACGAGGACATCATGGATGCCTATGAGCAGAAACTGGGGGCAAAATTGGCAGTCAAACGCGGTTTTGGTGGGTCAAGCGTTGTCGTTTAGAGTGGCTGCCAGTGACAGGCGCAGTTCCACTTCATGGAACATTGCTCCTCCTAACTGGCAATTTGGTCAAACTTTCACCGGAAAGAATTTTAGGGTCTGA 1005 0.5124 MRLPISDREGDVEGYDWATYPTYEKSEDSFNLVLRPWMRQVCVGMGRVPPPTAISLHIFFTLPSSLFPLHSLSLFTMALPILLCIASLISFLYQIEARLPGVYTGGAWESAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGFSCGACFEIKCANDKQWCHSGSPSIFITATNFCPPNFALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKRGGIRFTINGFRYFNLVLISNVAGAGDVVRTYVKGTRTSWMPMSRNWGQNWQSNAVLVGQALSFRVAASDRRSSTSWNIAPPNWQFGQTFTGKNFRV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0153 334 SMART dpbb_1 143 230 IPR007112 -
Mibi07g0153 334 FunFam Expansin 97 236 - -
Mibi07g0153 334 PRINTS Expansin signature 239 251 IPR002963 GO:0009664
Mibi07g0153 334 PRINTS Expansin signature 315 331 IPR002963 GO:0009664
Mibi07g0153 334 PRINTS Expansin signature 165 176 IPR002963 GO:0009664
Mibi07g0153 334 PRINTS Expansin signature 179 189 IPR002963 GO:0009664
Mibi07g0153 334 PRINTS Expansin signature 251 272 IPR002963 GO:0009664
Mibi07g0153 334 PRINTS Expansin signature 215 228 IPR002963 GO:0009664
Mibi07g0153 334 PRINTS Expansin signature 138 152 IPR002963 GO:0009664
Mibi07g0153 334 PRINTS Expansin signature 198 215 IPR002963 GO:0009664
Mibi07g0153 334 PRINTS Expansin signature 286 307 IPR002963 GO:0009664
Mibi07g0153 334 SUPERFAMILY PHL pollen allergen 237 329 IPR036749 -
Mibi07g0153 334 PRINTS Expansin/Lol pI family signature 107 122 IPR007118 GO:0005576
Mibi07g0153 334 PRINTS Expansin/Lol pI family signature 315 329 IPR007118 GO:0005576
Mibi07g0153 334 PRINTS Expansin/Lol pI family signature 147 165 IPR007118 GO:0005576
Mibi07g0153 334 PRINTS Expansin/Lol pI family signature 277 291 IPR007118 GO:0005576
Mibi07g0153 334 PRINTS Expansin/Lol pI family signature 223 239 IPR007118 GO:0005576
Mibi07g0153 334 PRINTS Expansin/Lol pI family signature 125 143 IPR007118 GO:0005576
Mibi07g0153 334 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 250 329 IPR007117 -
Mibi07g0153 334 FunFam Expansin 240 332 - -
Mibi07g0153 334 Gene3D - 97 236 IPR036908 -
Mibi07g0153 334 PANTHER EXPANSIN-A15 87 332 IPR002963 GO:0009664
Mibi07g0153 334 Pfam Expansin C-terminal domain 241 318 IPR007117 -
Mibi07g0153 334 Gene3D - 240 332 IPR036749 -
Mibi07g0153 334 Pfam Lytic transglycolase 143 230 IPR009009 -
Mibi07g0153 334 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 126 240 IPR007112 -
Mibi07g0153 334 SUPERFAMILY Barwin-like endoglucanases 107 258 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0153 Mibi-ChrMibi07 2182477 2185487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0153 77 334 Expansin Gene Family AT2G39700 80.233 3.35e-159 444