Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0145 ATGGATCTTCACTTTGATAAAAGTCAAGGTTTTGTAAGCAGTTATAAACATGACGATGGCGCCGCCATCTCCGATTCAAACAATTTCCCATATCCATCGAACGATTGGGAAATCGATGAAAGCTATCGGAATCTTCTTAACCTCACAACTGATCCCTTGTATCAACCTTATGCTGCTCCGGTCAATTTTTCCCAACATAGTACCGTGAAATACGGAGGATCAGAGCGGTTAGTTTCGTCCTCAACTATAAACCCTGTCGGAGAAATATCAGAAGTGGCGGCTGCGTCAACGAATTCGCCGCCAGATCCTTCTCTGGAAGACGCTGACTTTTCAGAAACTATGAGGTACATAAGCCAAATGCTCATGGAAGAGAATTTTGAACAGAAGCCAAGCATGTTTTATGATCCTCTGAGTCTACAAAACACAGAGAAATCATTCTATGATGCTCTCAGAAGGAATCACCCTCATTCCCCCAATCAGCATCCCCTTGATGTTCATCAAAATCTTGATAGCACAGATGATAACTGTTGTGTTAGCAGCAGTAGTATTGATTGTGTCCATGAAAGTAGCAGAAGCAACAAGTATCAGGGAGCTAATAAGCCCTCTTCCTCTGATGCTCCATTTTCTGGTGATTACGCTTCCCAGTTGAATTTTCAGCCCATTACCTCTGAACCTCCCAGTGCTTATACTTATATCATTGACGGATTGTCAGATGCAGATTCCTCTTTTACTAGGACCTTGGCTCATAATATCTTCACTGATGCAGAATCTGTTTCGCAATTTAAAAGGGGGTTGGAAGAAGCAAGCAAGTTTCTTCCTAGAGGGCTTAAACTTATCCCTGATCCGGAGAGCAACAAATTGATTCCAGAGTCAATGGGAGCGGCTAAAAAGAAAGTGGGAAATATTTGGGAGAATTCACATGGAGTAAAGGGTAGGAAGAATCATGAACGTGAAGCTAGTGATACAGAAGAAGGGAGAAGTAATAAGCAGTCGGCGGTGTTTATGGACGAGAGTGAGATATCGGATATGTTTGATAATGTGCTGCTTAGTATTGATAGTGTTCCATTAGATGAGGATCACCACAAATGGTTGCAGAATGGAACAGACAAGGTAAAAGAGGCCACTAGTGAGCAGCCAAATCCATCTAATAATGGGGTGAAGACCCGAGGTAGGAGACAAGGCAGGAAGAAGGAAACCGTGGATTTGAGGACTCTTATGGCTCTGTGTGCTCAAGCTGTGTCTGCAAATGACTGTAGAAGTGCCAGTGAACTACTAAAGCAGATCAGGCAGCATTCTTCCAAACTTGGTGATGCATCACAAAGGTTGGCTCATTACTTTGCCAATGGCCTTGAGGCACGCTTGTCTGGATGTGGTACTAGAACCCAAATATTCTATGCCTCTCTAAGCTCCAAGAGGATATCTTCTGCTCAAATCTTGAGAGCTTACTCGGTTCTAATATCTGTCTGCCCCTTCAGGAGGTTTTCATACTTTTTTGCTAATAAGACGATTTATACTGCGGCTGAAAAGGCAGAAACTCTTCATATTGTCGATTTTGGCATTCAATATGGCTTCCAGTGGCCAATTCTCATCAAGTTTCTTTCCCAAAGAGCTGGTGGGCCTCCTAAGCTACGCATCACAGGGATAGAATTGCCCCAAGCTGGGTTTCGTCCAGCAGAATTAATTGAGGAGACTGGACGGCGTCTATCTAATTATTGCAAACGTTTTGAGGTTCCGTTTGAATACAAAGCCATAGCATCACAAAACTGGGAAACCATCCCGTTGAAGGACTTTAAGATTGAGAGGAACGAATTTCTTGTCGTGAACTGTCTGCAGAGATTTAAGAATTTGCTGGACGAGACAATTCAAGTAAAGAGTCCTAGAGATGCAATTTTCAACTTGATCAGAAAGATGAATCCTGATATATTTGTTCTGTCCACTGTCAATGGATCCTACAATGCCCCTTTCTTTGCCTCACGGTTCAAAGAGGCAATGTTCCATTATTCTGCAATGTTTGATGTGTTTGACACTGTCATACCTCGTGAGAATGAATGGAGGTTGATGTTTGAGAGAGAATTTATGGGTCGGGAGATCATGAACGTGGTTGCATGTGAAGGGGTTGAGAGGGTTGAGAGGCCTGAGACATACAAACACTGGCAAGTCAGGGGCACCAGGGCTGGTTTCAGGCAGCTGCCATTGCCAGATGATTTAATGGTAAAGTTCAGCGAAAAGTTGAAGGCATGGTATCACAAGGATTTTGTAATTGATGAAGACAACAACTGGATGCTTCAAGGCTGGAAGGGCCGCATCATTTGTGCTTCCACATGTTGGGTGCCATCATAA 2340 0.4333 MDLHFDKSQGFVSSYKHDDGAAISDSNNFPYPSNDWEIDESYRNLLNLTTDPLYQPYAAPVNFSQHSTVKYGGSERLVSSSTINPVGEISEVAAASTNSPPDPSLEDADFSETMRYISQMLMEENFEQKPSMFYDPLSLQNTEKSFYDALRRNHPHSPNQHPLDVHQNLDSTDDNCCVSSSSIDCVHESSRSNKYQGANKPSSSDAPFSGDYASQLNFQPITSEPPSAYTYIIDGLSDADSSFTRTLAHNIFTDAESVSQFKRGLEEASKFLPRGLKLIPDPESNKLIPESMGAAKKKVGNIWENSHGVKGRKNHEREASDTEEGRSNKQSAVFMDESEISDMFDNVLLSIDSVPLDEDHHKWLQNGTDKVKEATSEQPNPSNNGVKTRGRRQGRKKETVDLRTLMALCAQAVSANDCRSASELLKQIRQHSSKLGDASQRLAHYFANGLEARLSGCGTRTQIFYASLSSKRISSAQILRAYSVLISVCPFRRFSYFFANKTIYTAAEKAETLHIVDFGIQYGFQWPILIKFLSQRAGGPPKLRITGIELPQAGFRPAELIEETGRRLSNYCKRFEVPFEYKAIASQNWETIPLKDFKIERNEFLVVNCLQRFKNLLDETIQVKSPRDAIFNLIRKMNPDIFVLSTVNGSYNAPFFASRFKEAMFHYSAMFDVFDTVIPRENEWRLMFEREFMGREIMNVVACEGVERVERPETYKHWQVRGTRAGFRQLPLPDDLMVKFSEKLKAWYHKDFVIDEDNNWMLQGWKGRIICASTCWVPS 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0145 779 MobiDBLite consensus disorder prediction 188 211 - -
Mibi07g0145 779 ProSiteProfiles GRAS family profile. 393 777 IPR005202 -
Mibi07g0145 779 MobiDBLite consensus disorder prediction 304 331 - -
Mibi07g0145 779 MobiDBLite consensus disorder prediction 370 388 - -
Mibi07g0145 779 MobiDBLite consensus disorder prediction 308 325 - -
Mibi07g0145 779 MobiDBLite consensus disorder prediction 370 397 - -
Mibi07g0145 779 Pfam GRAS domain family 403 776 IPR005202 -
Mibi07g0145 779 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 331 766 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0145 Mibi-ChrMibi07 2089142 2091481 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0145 113 779 GRAS Transcription Factor Family AT1G07530 47.857 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mibi07g0145 GRAS 2.6e-110 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0079 01 910146 912428 Mibi07g0145 07 2089142 2091481 CCT
Mibi07g0145 07 2089142 2091481 Mibi07g0145 07 2089142 2091481 ECH
Mibi08g1173 08 26915961 26917697 Mibi07g0145 07 2089142 2091481 ECH