Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0138 ATGAGTTTCGTCTTTCGAGGGGATAGAGGAGATATTGAAAGTGGATTTTCAGAATTTGTTCCTGAAAGAACCACGATGCGTGTCCATCCATCCCGGCCCGTAAATAGCAATACTGTAGCTTTTCTCATTACAGTTATCTTGCTGTTTATGATATTGAACTCTCCCCAAATGTCACATTTCTTGATGTGGCTTATGCTGGTTGTGTTTGTGATGGCCACAAGCCTGAGGATGTATGTAACTTGGCAACAACTTCAAGCTCAAGCAACGGCTCATGCCACAGCAGCTGAATTACAACTTCATGTGCCACCGTCAATAGCTATTGCAACTAGAGGACGCTTGCAAGGACTCAGACTTCAGCTCGCACTTCTTGACCGTGAATTTGATGAGCTTGATAATGAAACATTGAGGGCTCTAGAATCTGACACTGCTTCTAGTACTACTTCAATGACTGATGAAGAGATAAATGCCTTACCTGTTCACACATATAAGGTTCCTGTCCCAACAAAGGATGGCTCAGCTGGGTTGGGATCCTCTTCACGTGCAACTGAGGTTAAGCAAGATAATGGAGGGACAGAGCGAAATGTGAAGGGTACAAAAGATGAGCTAACGTGTACTATATGTTTGGAACAAGTGAAGAGAGGGGAACTAGTTCGTAGCTTGCCATGTTTGCATCAGTTTCATATGAACTGCATAGACCCATGGCTGCGACAGCAAGCAAAATGCCCTGTGTGTAAATTCAGGATGGGATCTGGATGGCAGGTAAACAGGGGGGACACAGAACCTGAAGGTTTAGATATTGTGTAG 804 0.4428 MSFVFRGDRGDIESGFSEFVPERTTMRVHPSRPVNSNTVAFLITVILLFMILNSPQMSHFLMWLMLVVFVMATSLRMYVTWQQLQAQATAHATAAELQLHVPPSIAIATRGRLQGLRLQLALLDREFDELDNETLRALESDTASSTTSMTDEEINALPVHTYKVPVPTKDGSAGLGSSSRATEVKQDNGGTERNVKGTKDELTCTICLEQVKRGELVRSLPCLHQFHMNCIDPWLRQQAKCPVCKFRMGSGWQVNRGDTEPEGLDIV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0138 267 SUPERFAMILY RING/U-box 199 249 - -
Mibi07g0138 267 MobiDBLite consensus disorder prediction 168 195 - -
Mibi07g0138 267 Coils Coil 113 133 - -
Mibi07g0138 267 Pfam Ring finger domain 203 245 IPR001841 -
Mibi07g0138 267 SMART ring_2 204 244 IPR001841 -
Mibi07g0138 267 CDD RING-H2_PA-TM-RING 203 245 - -
Mibi07g0138 267 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 180 250 IPR013083 -
Mibi07g0138 267 ProSiteProfiles Zinc finger RING-type profile. 204 245 IPR001841 -
Mibi07g0138 267 PANTHER TARGET OF ERK KINASE MPK-1 1 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0138 Mibi-ChrMibi07 2020275 2022955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0138 1 253 C3H Transcription Factor Family AT3G55530 66.794 2.88e-113 325
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0138 07 2020275 2022955 Mibi07g0138 07 2020275 2022955 ECH