Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0127 ATGGAGAGTGAAGATCATAAGGAAACATCATCGTCAGAAACAAAAGCAAGTGATGAACAAGGAGGAAGTCAAGGGACAAGGTTGTACGAGTGCACCTTTTGTAAAAGGGGATTTTCTAATGCACAAGCTTTGGGAGGACACATGAATATTCATAGGAAAGATAAAGCCAAGATGAAGCAATCTGCCAACCAAGCTCAAGATCGTCGTCATCACGCATCTTTGGATGTTCATAGTAATAAGGTCGAAGACAGAACCAGAGAAGAAACCTCCGAACTTCGCATGAAGCAGCTTCCACTATTTGCAGAAATGCCTAGTGGAGAAACACAAAATCCAGAAGAATTCGACCATATTCATGATAGAGGAATTTCTGAAGAAATCAAGGGTTCGTCATCGGATTTAGACCTTGAACTCAGGCTAGGGCCTGATCCACCCTCTCCCTCTATTAGCACCCGAAAATTCTTTTGA 465 0.4237 MESEDHKETSSSETKASDEQGGSQGTRLYECTFCKRGFSNAQALGGHMNIHRKDKAKMKQSANQAQDRRHHASLDVHSNKVEDRTREETSELRMKQLPLFAEMPSGETQNPEEFDHIHDRGISEEIKGSSSDLDLELRLGPDPPSPSISTRKFF 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0127 154 MobiDBLite consensus disorder prediction 119 154 - -
Mibi07g0127 154 SUPERFAMILY beta-beta-alpha zinc fingers 25 56 IPR036236 -
Mibi07g0127 154 MobiDBLite consensus disorder prediction 1 24 - -
Mibi07g0127 154 Pfam C2H2-type zinc finger 29 53 - -
Mibi07g0127 154 Gene3D Classic Zinc Finger 3 96 - -
Mibi07g0127 154 ProSiteProfiles Zinc finger C2H2 type domain profile. 29 56 IPR013087 -
Mibi07g0127 154 PANTHER OS07G0101800 PROTEIN 1 143 - -
Mibi07g0127 154 Coils Coil 48 68 - -
Mibi07g0127 154 SMART c2h2final6 29 51 IPR013087 -
Mibi07g0127 154 ProSitePatterns Zinc finger C2H2 type domain signature. 31 51 IPR013087 -
Mibi07g0127 154 MobiDBLite consensus disorder prediction 51 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0127 Mibi-ChrMibi07 1927552 1928016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0127 22 150 C2H2 Transcription Factor Family AT3G53820 39.416 3.55e-20 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi07g0127 zf-C2H2_6 7.7e-06 CL0361