Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0097 ATGAGAATCTACTCTCTCTATTCCCAATGTTTGAAAAGAAGCCTTGATATTTTCCTGCTTGTGCGCCCCATTGACAGTAAATTTCACGCTGCAGAGCAATTGTCTGACAAAGAATTCAAAATGAGTTGGAACACACACATGGAGGTCCACTACAACAATATCAGCTACCCCTACAATACAGCAGGAAGCTTTATTGAATATTTTGAAGGCTTGACCTACGAACATGTCAATTTCATTTTTTCTGGTGCTTCACATGCTCAGGAGAGCTTGTACCCATCAACTACAAGCTTCTACAAGTTTGGCCCATCTGAGCTTGAGAATACTTCATACTATCGTTACAGTGATGGTTTTGAGGTGAATAATCATGAGCCAAGGATGGATGAGCACAGAAGGCCTTTAGAGAACACAGCAATATTTACTGAACATGCTGCAGCAGCAAGTACAGAATGGGGTGAAGGTGTACACACCGCTGCACGTGACAATTCTGTTGAATGTCCAAGAAGACATAATAATTCGCATGACTATCAGGTCACTTGGCAAGACAATATCGATCCCGACAACATGTCCTATGAGGAATTACTTGAGTTAGGTGAGACTGTTGGAACTCAAAGCCGTGGCCTCTCCCAAGAACAGATCTCTTTGCTTCCAGTTTCAAAGTACAAGTGTGGATTTTTCTTACGCAGAAAATCACGGGATGAGAGATGTGTGATTTGCCAGATGGAATATAGAAGAGGCGAAAAACGGATCACTTTACCTTGCAAACATATCTATCATGCTGGGTGTGCAACAACATGGCTTAGCATAAACAAGGCTTGCCCTATATGTTACACGGAGGTTTTCGCTGATATGTCAAAACGCAAATGA 864 0.4201 MRIYSLYSQCLKRSLDIFLLVRPIDSKFHAAEQLSDKEFKMSWNTHMEVHYNNISYPYNTAGSFIEYFEGLTYEHVNFIFSGASHAQESLYPSTTSFYKFGPSELENTSYYRYSDGFEVNNHEPRMDEHRRPLENTAIFTEHAAAASTEWGEGVHTAARDNSVECPRRHNNSHDYQVTWQDNIDPDNMSYEELLELGETVGTQSRGLSQEQISLLPVSKYKCGFFLRRKSRDERCVICQMEYRRGEKRITLPCKHIYHAGCATTWLSINKACPICYTEVFADMSKRK 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0097 287 FunFam E3 ubiquitin ligase BIG BROTHER 197 280 - -
Mibi07g0097 287 Pfam Ring finger domain 234 275 IPR001841 -
Mibi07g0097 287 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 44 280 IPR033276 GO:0004842|GO:0016567|GO:0046621
Mibi07g0097 287 SUPERFAMILY RING/U-box 228 283 - -
Mibi07g0097 287 SMART ring_2 235 275 IPR001841 -
Mibi07g0097 287 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 197 281 IPR013083 -
Mibi07g0097 287 ProSiteProfiles Zinc finger RING-type profile. 235 275 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0097 Mibi-ChrMibi07 1545965 1551340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0097 48 284 C3H Transcription Factor Family AT3G63530 42.798 1.16e-65 204