Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0095 ATGAACTCAAACAACTGGCTCTCCTTCCCTCTTTCCCCTACTCAGTCTTCCTTACCCCCACAACTCCAAGCCACCCAATCCCATCAGTTCTCTCTTGGCTTAGTCAATGATTCCATGGAAAACCCTTTCCAAAATCATGATTGGAATCTGATGAATACACACGGGAGCAACGTTAATGAGGTACCGAAGGTGGCAGATTTTCTAGGAGTGGGGAAGTCTGAGAATCAGTCAGATCTTGCAGCCTTTAATGAAATTCATCAGTCAAATGAATCTGGTTACCTATTCACAAACAGCAGTCTGGTTCCGATGCAAAGCTCAGTGGTGGCCGCTAATTCTGCCACCAACTTCGACTATCAAGAAAACAACAATGCCAATACTAACCTCCAGTCTTTGACATTATCTATGGGCAGTGGTAAGGATTCTACCTGTGAAACTAGCGGTGACAATAGTGCTAATACTACTCCCGTTGAAGCTGCTGCTCCTAGAAGGACTTTAGACACATTCGGTCAGAGAACCTCAATCTATCGAGGTGTAACCAGACATAGATGGACTGGAAGGTATGAAGCTCATCTTTGGGATAATAGTTGTAGAAGGGAAGGACAATCACGAAAGGGACGCCAAGGTGGATATGACAAAGAAGAGAAAGCGGCTAGGGCCTACGATTTAGCGGCACTAAAGTACTGGGGAACATCCACAACTACCAACTTTCCTATCAGTAACTATGAGAAGGAACTGGAAGAGATGAAGCACATGACAAGACAAGAATTTGTGGCTGCCATTCGAAGGAAGAGCAGTGGGTTCTCTAGGGGTGCATCAATGTATCGCGGAGTCACAAGGCACCATCAACATGGTAGATGGCAGGCAAGGATCGGTAGAGTCGCGGGAAACAAAGATCTTTACTTGGGAACTTTCAGTACTGAGGAAGAAGCTGCAGAAGCATATGACATAGCAGCAATCAAGTTCAGAGGATTAAACGCAGTAACAAACTTCGACATGAGCCGATACGACGTGAAAGCCATACTTGAAAGCAACACACTCCCAATAGGAGGAGGAGCTGCAAAAAGACTGAAGGAAGCTCAGGCTCTAGAATGTTCTAGAAAGAGGGAGGAAATGATAGCTCTCGGGTCAACCTTTCAATACGGCAGCGGAAGTGGCGGCGGAGGAGGAGGAGGCAGCTCAAGCAGGCTACAACTACAAGCCTACCCACTAATGCAGTTAGATCAAACACAACCATTGTTAAGCCTACAAAACCAAGACATATCTCAGTACTCTTCACTTCATCATCATCATCATCATCCAAGTTATATTCAAACACAACTTCAGTTGCACCATCAAGCTGGTTCATCTAACTATAATAACTTCCACCACCAGTCACCTAGTAATAATGCTCAGTTGTATAACAGCTACCTTCAGAATCATCCGGCTCTGCTTCAGGGATTGATGAACATGGGGTCATGCTCTTCTTCTGTGATGGACAATAATGATGGAGGGTCTAGTGGTGGTAGTTATAGCAATGGTGGTGGAGGGTTTATGGGAATGGCTTCCAATACGACGTCGGTTGGATCGGCGGAGGAGTTGGCTCTGGTGAAGGTGGAAAACTATAACATGCCTTCCGGCGGCGGTTATGGCGGCGGTTGGCCGTCGGAGTCCATGCAGGGATCCAATGCTGCTCTCTTCACTATGTGGAATGACTGA 1695 0.4625 MNSNNWLSFPLSPTQSSLPPQLQATQSHQFSLGLVNDSMENPFQNHDWNLMNTHGSNVNEVPKVADFLGVGKSENQSDLAAFNEIHQSNESGYLFTNSSLVPMQSSVVAANSATNFDYQENNNANTNLQSLTLSMGSGKDSTCETSGDNSANTTPVEAAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALECSRKREEMIALGSTFQYGSGSGGGGGGGSSSRLQLQAYPLMQLDQTQPLLSLQNQDISQYSSLHHHHHHPSYIQTQLQLHHQAGSSNYNNFHHQSPSNNAQLYNSYLQNHPALLQGLMNMGSCSSSVMDNNDGGSSGGSYSNGGGGFMGMASNTTSVGSAEELALVKVENYNMPSGGGYGGGWPSESMQGSNAALFTMWND 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0095 564 ProSiteProfiles AP2/ERF domain profile. 174 237 IPR001471 GO:0003700|GO:0006355
Mibi07g0095 564 Gene3D AP2/ERF domain 273 333 IPR036955 GO:0003700|GO:0006355
Mibi07g0095 564 Gene3D AP2/ERF domain 174 239 IPR036955 GO:0003700|GO:0006355
Mibi07g0095 564 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 82 424 - -
Mibi07g0095 564 SUPERFAMILY DNA-binding domain 173 239 IPR016177 GO:0003677
Mibi07g0095 564 CDD AP2 272 333 IPR001471 GO:0003700|GO:0006355
Mibi07g0095 564 FunFam AP2-like ethylene-responsive transcription factor ANT 173 239 - -
Mibi07g0095 564 PRINTS Ethylene responsive element binding protein signature 313 333 IPR001471 GO:0003700|GO:0006355
Mibi07g0095 564 PRINTS Ethylene responsive element binding protein signature 175 186 IPR001471 GO:0003700|GO:0006355
Mibi07g0095 564 CDD AP2 173 239 IPR001471 GO:0003700|GO:0006355
Mibi07g0095 564 SUPERFAMILY DNA-binding domain 272 333 IPR016177 GO:0003677
Mibi07g0095 564 FunFam AP2-like ethylene-responsive transcription factor 272 333 - -
Mibi07g0095 564 Pfam AP2 domain 274 323 IPR001471 GO:0003700|GO:0006355
Mibi07g0095 564 Pfam AP2 domain 174 229 IPR001471 GO:0003700|GO:0006355
Mibi07g0095 564 SMART rav1_2 273 337 IPR001471 GO:0003700|GO:0006355
Mibi07g0095 564 SMART rav1_2 174 243 IPR001471 GO:0003700|GO:0006355
Mibi07g0095 564 ProSiteProfiles AP2/ERF domain profile. 273 331 IPR001471 GO:0003700|GO:0006355
Mibi07g0095 564 MobiDBLite consensus disorder prediction 1 21 - -
Mibi07g0095 564 MobiDBLite consensus disorder prediction 136 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0095 Mibi-ChrMibi07 1536204 1538951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0095 1 564 AP2-EREBP Transcription Factor Family AT1G51190 63.773 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi07g0095 AP2 2.6e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0095 07 1536204 1538951 Mibi07g0095 07 1536204 1538951 ECH