Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0092 ATGGAGTCAGATCTTGAGCAACACTCTTCAATGTTACATGGTCACCAGCAACAGCAGCAGCAGATGAATTCTGGTTTGACACGGTATCGATCGGCACCCAGCTCGTATTTCACGAATATCATAGACAAGGAATTTTATCAGGACATGTTCAATCGTCCTTCCAGCCCAGAAACAGAGCAAATCTTTTCACGCTTTATGAATAGCCTTGCTAACGAGTCTGAGGATGCACCAGCTCAATATCTTACATCTGTTCGACCAAATTCTACAGTGAAAGAAGAGATAGATCAGCAACCTCAGATTTTGCCTTCAGTAAACAATGAACCTGTGGCTCTCCACCATCAACAGCAGCAGCAACAGAACAGTATGAATAATTTTGTTTCTGCTCCACAGAATCCTTTCCCAAGCTCAGGTCGTCCTCCTTTGCCAAATCAAAACTTGACTTCATCAGCTATGGATGGACCTTTTTCGACTGGAGGCCATAGATTGCAGCAAGTGAAGGCTCCTGATGCAAATAATTCCAATCTAATCAGGCACAATAGCTCACCTGCAGGATTCTTTTCCACCTTAAACATTGAGAGCTTTGCTTCTTCTATGAGAGGCACGGGCATGATGGGTGCTGGTAGTAACACGAGCGAAGAAGCAAACTTCTCTTCTGCGATGAGGATGAAAAATCAGCCAAAATACTCGACTGGACTGATGTCATCCATAGCTGAGGTTGGGGACAAAGGCGACACCGAACAAAATCTAGACACTGAATCTTTTGCTGAAAGCCAAGGTAATGAGTTTATCACAGGTTTCCCCCCTTGGGACGATTCTGCCCTCATGTCTGACAGTACTGCTGGACTAAAGAGATTTAGGGAGGAGGATGCAAAAACATTTTCTGAGACTCAGAATGAGACAGGCAGCCAGCCTCGTCCTGCTCCTTTGGCTCATCACCTCAGTTTGCCAAAAACTTCAGCGGAAATGGCAGCCATTGAAAAGTTTCTGCAGTTCTCAGATTCTGTTCCCTGTAAAATACGTGCCAAGAGAGGCTGTGCTACTCACCCAAGAAGCATTGCAGAGAGGGTTAGAAGAACTAAGATCAGTGAGCGTATGAGGAAACTTCAAGATCTGGTTCCCAACATGGACAAACAAACAAACACATCAGACATGTTGGACCTGGCTGTCGACTACATTAAAGACCTTCAAAAGCAGGTTGAGACACTTTCAGACAGTCACGCAAAGTGCACGTGTCCACACAAGCAGATGCAGTAA 1254 0.4506 MESDLEQHSSMLHGHQQQQQQMNSGLTRYRSAPSSYFTNIIDKEFYQDMFNRPSSPETEQIFSRFMNSLANESEDAPAQYLTSVRPNSTVKEEIDQQPQILPSVNNEPVALHHQQQQQQNSMNNFVSAPQNPFPSSGRPPLPNQNLTSSAMDGPFSTGGHRLQQVKAPDANNSNLIRHNSSPAGFFSTLNIESFASSMRGTGMMGAGSNTSEEANFSSAMRMKNQPKYSTGLMSSIAEVGDKGDTEQNLDTESFAESQGNEFITGFPPWDDSALMSDSTAGLKRFREEDAKTFSETQNETGSQPRPAPLAHHLSLPKTSAEMAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQKQVETLSDSHAKCTCPHKQMQ 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0092 417 SMART finulus 351 401 IPR011598 GO:0046983
Mibi07g0092 417 Pfam Helix-loop-helix DNA-binding domain 350 396 IPR011598 GO:0046983
Mibi07g0092 417 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 348 410 IPR036638 GO:0046983
Mibi07g0092 417 MobiDBLite consensus disorder prediction 140 154 - -
Mibi07g0092 417 FunFam Transcription factor bHLH130 family 346 415 - -
Mibi07g0092 417 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 345 395 IPR011598 GO:0046983
Mibi07g0092 417 Gene3D - 346 416 IPR036638 GO:0046983
Mibi07g0092 417 MobiDBLite consensus disorder prediction 109 161 - -
Mibi07g0092 417 MobiDBLite consensus disorder prediction 10 26 - -
Mibi07g0092 417 MobiDBLite consensus disorder prediction 291 311 - -
Mibi07g0092 417 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 75 411 - -
Mibi07g0092 417 MobiDBLite consensus disorder prediction 109 132 - -
Mibi07g0092 417 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0092 Mibi-ChrMibi07 1474839 1477167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0092 1 411 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 40.465 7.45e-79 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi07g0092 HLH 1.1e-09 No_clan