Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0076 ATGGACTCCGAAGATGATATGCATGATGCCAACGACGTCGAGTCCCTTGATGATGATTTCTACAGCGGTGAGACTGAGGATGTTCCTATGGATTACTACAGCGACTACGGTGATGATGGTGATGATTACTTTGACGATGCCGATGAATCTGACAAGCCTGAGTCTCACCGCCCCGAGCAAAATTTTACCATCTTGAGAGAATCAGATATTCGGCAAAGACAAGGGGATGACATAACAAAAGTAGCGACTGTTCTTTTTATCTCGACAGAGGCTGCAAGCATCTTACTTCGTCACTATAATTGGAATGTCAGCGAAGTGCATGAGGCATGGTTTGCCAATGAAGAAAATGTCCGAAGAACAGTTGGCTTACTTGAGAAGCCAGTTGTTCAGTTTCCTAACGCTAGTGAGCTTACTTGTGGCATCTGTTTTGAAACTTATCCCTGTTCACGGATTAAATCTGCTGCTTGTGGTCACCCCTTCTGCATCTCATGCTGGGAAGGGTATATTGGCACTGCTATTAATGATGGTCCTGGATGTTTGATGCTGCGGTGTCCTGATCCCTCTTGTGGTGCCGCTGTTGGTCAAGATATGATTGATGAACTAGCGTCTGTTGAGGATAAGCAGAAGTATTCTCGCTACCTTCTTAGGTCCTATGTTGAAGACAACAAGAAGACTAAGTGGTGTCCTGCTCCTGGTTGTGAATATGCGGTTACATTTGATGCTGGTAGTGGAAACTATGATATTTCTTGCCTCTGTTCTTATTGCTTCTGCTGGAATTGCACTGAGGAGGCTCATCGTCCTGTGGATTGTGGCACTGTGGCAAAGTGGATTTTGAAGAATAGTGCTGAGTCTGAGAACATGAACTGGATTCTTGCCAACTCCAAGCCATGTCCCAAGTGCAAGCGACCAATTGAGAAAAACCAAGGGTGCATGCATATGACATGCACACCTCCTTGTAAATTTGAATTTTGCTGGCTATGCCTTGGTGCCTGGTCAGACCATGGTGAAAGAACTGGGGGTTTCTATGCTTGCAATCGTTATGAGGCTGCTAAACAAGAGGGAGTGTATGATGAAGCTGAAAGAAGAAGAGAGATGGCAAAGAACTCGTTGGAGCGATATACACATTACTATGAGCGGTGGGCTAGCAATCAATCATCGAGGCAAAAGGCTCTTGCAGATCTAAATCAGATGCAAACTGTCCATCTTGAGAAGCTTAGTGACACACAGTGCCAACCTGAGTCACAGCTTAAGTTCATAACCGAGGCCTGGCTACAGATAGTTGAATGTAGGCGAGTGCTGAAGTGGACATATGCATATGGATACTATTTACCAGAGCATGAGCATGCTAAAAAACAATTTTTTGAATACTTACAAGGTGAGGCTGAGTCTGGTTTGGAGAGACTTCATCAATGTGCTGAAAAGGAATTACAACAGTATCTCAATGCTGATGGTCCATCTAAAGAGTTCAATGACTTCCGGACCAAGCTAGCTGGACTGACCAGCGTGACCAAAAATTACTTCGAGAATTTGGTTAGAGCATTAGAGAACGGTTTATCTGATGTAGATAGTAATGGAGCTACTTCCAGCAAAGCAACAAGCTCAAAAAATACTGCAGGCAGCAGCAAGGGGAGAGGTGGAAGGGGAAAAGGATCTACACGAACCAGCGGTTCCAATAGAACGATGGATGATTAA 1692 0.4456 MDSEDDMHDANDVESLDDDFYSGETEDVPMDYYSDYGDDGDDYFDDADESDKPESHRPEQNFTILRESDIRQRQGDDITKVATVLFISTEAASILLRHYNWNVSEVHEAWFANEENVRRTVGLLEKPVVQFPNASELTCGICFETYPCSRIKSAACGHPFCISCWEGYIGTAINDGPGCLMLRCPDPSCGAAVGQDMIDELASVEDKQKYSRYLLRSYVEDNKKTKWCPAPGCEYAVTFDAGSGNYDISCLCSYCFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHMTCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDEAERRREMAKNSLERYTHYYERWASNQSSRQKALADLNQMQTVHLEKLSDTQCQPESQLKFITEAWLQIVECRRVLKWTYAYGYYLPEHEHAKKQFFEYLQGEAESGLERLHQCAEKELQQYLNADGPSKEFNDFRTKLAGLTSVTKNYFENLVRALENGLSDVDSNGATSSKATSSKNTAGSSKGRGGRGKGSTRTSGSNRTMDD 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0076 563 SMART ibrneu5 208 270 IPR002867 -
Mibi07g0076 563 SMART ibrneu5 274 344 IPR002867 -
Mibi07g0076 563 SUPERFAMILY RING/U-box 135 217 - -
Mibi07g0076 563 MobiDBLite consensus disorder prediction 521 563 - -
Mibi07g0076 563 SUPERFAMILY RING/U-box 289 337 - -
Mibi07g0076 563 SUPERFAMILY RING/U-box 209 277 - -
Mibi07g0076 563 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 221 IPR013083 -
Mibi07g0076 563 ProSiteProfiles TRIAD supradomain profile. 135 348 IPR044066 -
Mibi07g0076 563 MobiDBLite consensus disorder prediction 1 59 - -
Mibi07g0076 563 FunFam RBR-type E3 ubiquitin transferase 271 521 - -
Mibi07g0076 563 Pfam Ariadne domain 357 518 IPR045840 -
Mibi07g0076 563 Coils Coil 349 376 - -
Mibi07g0076 563 Pfam IBR domain, a half RING-finger domain 208 270 IPR002867 -
Mibi07g0076 563 Pfam IBR domain, a half RING-finger domain 287 335 IPR002867 -
Mibi07g0076 563 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 72 436 IPR031127 GO:0004842|GO:0016567
Mibi07g0076 563 FunFam RBR-type E3 ubiquitin transferase 133 222 - -
Mibi07g0076 563 MobiDBLite consensus disorder prediction 1 48 - -
Mibi07g0076 563 ProSiteProfiles Zinc finger RING-type profile. 139 183 IPR001841 -
Mibi07g0076 563 Gene3D - 266 521 - -
Mibi07g0076 563 CDD RING-HC_RBR_TRIAD1_like 139 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0076 Mibi-ChrMibi07 1280818 1287413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0076 17 543 ARIADNE family AT1G65430 72.897 0.0 814