Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0075 ATGCACGATGCCAACGATGTCGAGTCCCTAGATGATGATTTCTACAGCGGTGGGACAGATGATGCTCCTTTGGATTACTACAGCGACTACGATGATGATGCTGATGATTGCTTTGACGATGGTGATGAATCTGACAAGATCGAGTCTCTTCGCTCCGAGCAAAATTTCACCATCTTGAAGGAGTCAGATATTCAGCAAAGGCTGGAGGGTGATATTACAAGAGTAGCGACCGTTCTTTGTATCTCACGAGCTGGTGCCGCCATCTTACTTCGTCACTATAATTGGAATGTCAGCGAAGTGCATGAAGCATGGTTTGCTAATGAAGAACATGTCCGAAGAACAGTTGGGTTATTGGAAGGGCAAGTTGTCCAGTTCCCTAATGCTAAGGAGTGCGTTGCTTGTGGTCATCCCTATTGCATCTCATGTTGGGAAGCTATTAATGATGGTCCTGGATGTTTGATGCTGCGGTGTCCTGATCCCTCTTGTGGTGCAGCTGTTGGTCAAGACATGATTGATCGAATAGCATCTCAAGAGGATAAGCAGAAGTATTCCCGTTACCTTCGTAGGTCCTATGTCGAAGACAACAAGAAGACCAAGTGGTGTCCTGCTCCAGGATGTGAATATGCAGTTACATTTGATGCTGGTGGTGGAAATTATGATGTTTCTTGCCTCTGTTCTTATTGCTTCTGCTGGAATTGCACTGAGGAGGCTCACCGTGCTGTGGATTGTGGCACTGTGGCAAAGTGGATTTTGAAGAACAGTGCAGAGTCTGAGAACATGAACTGGATACTTGCCAACTCAAAGCCCTGTCCCAAGTGCAAGAGACCAATTGAAAAAAACCAAGGGTGCATGCACATGACCTGTACACCCCCTTGTAAATTTGAATTTTGCTGGCTATGCCTTGGTGCATGGTCAGAGCATGGTGAAAGGACTGGTGGTTTCTATGCTTGCAATCGTTATGAGGCAGCTAAGCAAGAGGGAGTGCTTGAGAAGCTTAGCGACATACAGTGCCAACCTGAGTCACAGCTTAAGTTCATAACTGAGGCCTGGCTGCAGATAGTTGAATGTAGGCGAGTGCTGAAGTGGACATATGCTTATGGGTACTATCTACCAGAGAATGAGCATGCTAAAAAACAGTTTTTTGAGTACTTACAAGGTGAGGCAGAATCCGGTTTGGAGAGACTTCATCAATGTGCTGAAAAGGAATTGCAGCAATTTCTTAATGCTGATGGCCCATCTAAAGAGTTTAATGACTTCCGGACCAAGCTAGCTGGACTGACCAGTGTGACTAGGAACTACTTTGAGAATTTGGTTAGAGCTTTAGAGAATGGTTTGTCAGACGTGGATAGTAATGGAGCTGCTTCCAGCAAAGCAATGAGCTCAAAAAATGCTGCTGGCAGCAGCAAGGGGAGAGGTGGAAGAGGAAAAGGAACCACCCGAACAAGCAATTCCAACAAAATGACTGATGATAGTAATTGGTATTGTGAGCACTGTACCTATGCAAATACTATATCTGTTAGCACTTGCCAAATGTGCCATCTACAGCGTCGATAA 1554 0.453 MHDANDVESLDDDFYSGGTDDAPLDYYSDYDDDADDCFDDGDESDKIESLRSEQNFTILKESDIQQRLEGDITRVATVLCISRAGAAILLRHYNWNVSEVHEAWFANEEHVRRTVGLLEGQVVQFPNAKECVACGHPYCISCWEAINDGPGCLMLRCPDPSCGAAVGQDMIDRIASQEDKQKYSRYLRRSYVEDNKKTKWCPAPGCEYAVTFDAGGGNYDVSCLCSYCFCWNCTEEAHRAVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHMTCTPPCKFEFCWLCLGAWSEHGERTGGFYACNRYEAAKQEGVLEKLSDIQCQPESQLKFITEAWLQIVECRRVLKWTYAYGYYLPENEHAKKQFFEYLQGEAESGLERLHQCAEKELQQFLNADGPSKEFNDFRTKLAGLTSVTRNYFENLVRALENGLSDVDSNGAASSKAMSSKNAAGSSKGRGGRGKGTTRTSNSNKMTDDSNWYCEHCTYANTISVSTCQMCHLQRR 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0075 517 MobiDBLite consensus disorder prediction 452 467 - -
Mibi07g0075 517 ProSitePatterns Zinc finger RanBP2-type signature. 493 512 IPR001876 -
Mibi07g0075 517 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 63 363 IPR031127 GO:0004842|GO:0016567
Mibi07g0075 517 Gene3D - 486 517 - -
Mibi07g0075 517 MobiDBLite consensus disorder prediction 452 486 - -
Mibi07g0075 517 Gene3D - 241 334 - -
Mibi07g0075 517 MobiDBLite consensus disorder prediction 1 25 - -
Mibi07g0075 517 SMART ibrneu5 181 243 IPR002867 -
Mibi07g0075 517 SMART ibrneu5 247 317 IPR002867 -
Mibi07g0075 517 ProSiteProfiles TRIAD supradomain profile. 107 321 IPR044066 -
Mibi07g0075 517 Pfam IBR domain, a half RING-finger domain 181 243 IPR002867 -
Mibi07g0075 517 Pfam IBR domain, a half RING-finger domain 260 307 IPR002867 -
Mibi07g0075 517 SUPERFAMILY RING/U-box 182 250 - -
Mibi07g0075 517 SUPERFAMILY RING/U-box 262 310 - -
Mibi07g0075 517 SUPERFAMILY Ran binding protein zinc finger-like 489 516 IPR036443 -
Mibi07g0075 517 SUPERFAMILY RING/U-box 132 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0075 Mibi-ChrMibi07 1271947 1278677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0075 11 516 ARIADNE family AT1G65430 60.720 0.0 676