Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0074 ATGGGAGGCTGCATATCGACGCCGGGCAAGACAATCCTTCGCCGGAAGTCAAAGGACAGCGCCAAGTCATCAACAACAAAATCTGACTTGCACGCGCCGCCGCCGCCGCAAAAAGCCTTCCACGTCCGCCCCGTCAACGTCATAGAGGACCCTGTCCCCAACAACATCTTCGACAAGTACGAGTTTGGCAAGGAACTTGGACGCGGCGAGTTCGGCGTGACGCATAGATGTGTGGAGATTGAAACAGGGAAGGCGTACGCTTGCAAGAAGATCGCCAAGACGAAGCTTAGGACGGAGATTGATATCCAAGATGTGAAGAGAGAGGTTCAGATCATGAGGCATCTGCCAAAACATCCTAATATTGTCAGCTTTAAGGAAGCTTACGAGGACAAGGATGCTGTGTATCTCGTCATGGAGCTTTGTGAAGGTGGCGAGCTTTTTGACCGAATCGTAGCTAAAGGCCATTACACAGAACGTGCTGCTGCTAATGTTATCAAGACTATTCTCGAGATTTGCAAGGTATGTCATGAGCATGGGGTGATACATAGGGATTTGAAGCCTGAAAATTTCTTATTTGGAGATACCAGTGAGTGTGCTCCCGTCAAGGCAATTGATTTTGGGCTTTCCACCTTCTATGAATCAGGTACCCACAGCTCTATTTATTGTAGTATAGAATCAATCGGTTTTCCAATTTTTAAGGAGGAAATTAGCCATGACGTGTGTTTTGGGTTATACTACATTACAGGGCAGAGGTTTAATGAAATTGTTGGAAGTCCCTATTACATGGCTCCAGAAGTCTTGAGGCGTAACTATGGACCAGAAATTGATGTGTGGAGCGCTGGCGTCATCCTTTATATTTTACTTTGTGGAGTTCCACCCTTTTGGGCAGAGTCTGAGGAAGGGATTGCACAGGCGATCATCCGAGGAAACATCGATTTCGAGAGGGATCCTTGGCCTAAGGTTTCAGAAGAAGCAAAAAGCCTAGTTAAAAGCATGCTTGATCCAAATCCGTACAGTCGATTGACTAGTCAAGAAGTTCTTGAACATCCGTGGATACAGAAGAGAGACCAGGGTCCTGATGTTTATCTAGGAGACCATGTCCGAATGAGAATCAAGCAATTTTCCTTGATGAACAAGTTCAAGAAGAAAGTTCTTAGAGTGGTGGCAGACAGCCTTCCAGTTGAGCAAATAGATTGCATCAAGCAGATGTTCCATATGATGGACAAGGATAAAAATGGAAACTTGTCATTTGAAGAGCTCAAAGATGGCCTCTCTAGAATTGGTCACCCTCTTCCTGATTCTGATGTACAGATGTTATTGGACGCAGCAGATACTGATGGAAATGGCTCACTGAATTGTGAAGAGTTCATCACGATGAATGTCCATCTGGGGAAGATTGGAAGTGATGAGCATCTCTCTGAAGCTTTTAGTTACTTTGACAAGAATAAGAGTGGATATGTGGAATTTGATGAATTGAGAGAAGCCTTGTTGGATGAGGACTCAGGTATCTGTAATGACCAGGTGGTCCACGACATCATATTTGAAGTGGACTTGGATAAGGACGGTCGAATCAGTTATGAGGAGTTCAAGGCGATGATGAAGACAGGACCAGATTGGAAAATGGCTTCTCGCCAATATTCAAGAGCAATGCTTAGTGCGTTGAGCTTTAAATTATTCAATAACAAATCTATGAAATGTGCTTAA 1704 0.4448 MGGCISTPGKTILRRKSKDSAKSSTTKSDLHAPPPPQKAFHVRPVNVIEDPVPNNIFDKYEFGKELGRGEFGVTHRCVEIETGKAYACKKIAKTKLRTEIDIQDVKREVQIMRHLPKHPNIVSFKEAYEDKDAVYLVMELCEGGELFDRIVAKGHYTERAAANVIKTILEICKVCHEHGVIHRDLKPENFLFGDTSECAPVKAIDFGLSTFYESGTHSSIYCSIESIGFPIFKEEISHDVCFGLYYITGQRFNEIVGSPYYMAPEVLRRNYGPEIDVWSAGVILYILLCGVPPFWAESEEGIAQAIIRGNIDFERDPWPKVSEEAKSLVKSMLDPNPYSRLTSQEVLEHPWIQKRDQGPDVYLGDHVRMRIKQFSLMNKFKKKVLRVVADSLPVEQIDCIKQMFHMMDKDKNGNLSFEELKDGLSRIGHPLPDSDVQMLLDAADTDGNGSLNCEEFITMNVHLGKIGSDEHLSEAFSYFDKNKSGYVEFDELREALLDEDSGICNDQVVHDIIFEVDLDKDGRISYEEFKAMMKTGPDWKMASRQYSRAMLSALSFKLFNNKSMKCA 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0074 567 SUPERFAMILY EF-hand 392 534 IPR011992 -
Mibi07g0074 567 ProSitePatterns Protein kinases ATP-binding region signature. 66 89 IPR017441 GO:0005524
Mibi07g0074 567 ProSiteProfiles EF-hand calcium-binding domain profile. 504 539 IPR002048 GO:0005509
Mibi07g0074 567 ProSiteProfiles EF-hand calcium-binding domain profile. 431 466 IPR002048 GO:0005509
Mibi07g0074 567 SMART efh_1 508 536 IPR002048 GO:0005509
Mibi07g0074 567 SMART efh_1 399 427 IPR002048 GO:0005509
Mibi07g0074 567 SMART efh_1 435 463 IPR002048 GO:0005509
Mibi07g0074 567 SMART efh_1 471 499 IPR002048 GO:0005509
Mibi07g0074 567 ProSitePatterns EF-hand calcium-binding domain. 444 456 IPR018247 -
Mibi07g0074 567 SMART serkin_6 60 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0074 567 CDD STKc_CAMK 59 351 - -
Mibi07g0074 567 ProSiteProfiles Protein kinase domain profile. 60 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0074 567 ProSitePatterns EF-hand calcium-binding domain. 408 420 IPR018247 -
Mibi07g0074 567 Pfam Protein kinase domain 60 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0074 567 Gene3D - 361 535 - -
Mibi07g0074 567 FunFam Calcium-dependent protein kinase 1 62 145 - -
Mibi07g0074 567 Gene3D Phosphorylase Kinase; domain 1 62 145 - -
Mibi07g0074 567 FunFam Calcium-dependent protein kinase 7 361 537 - -
Mibi07g0074 567 SUPERFAMILY Protein kinase-like (PK-like) 56 353 IPR011009 -
Mibi07g0074 567 ProSiteProfiles EF-hand calcium-binding domain profile. 395 430 IPR002048 GO:0005509
Mibi07g0074 567 PANTHER SERINE/THREONINE-PROTEIN KINASE 54 529 - -
Mibi07g0074 567 MobiDBLite consensus disorder prediction 1 39 - -
Mibi07g0074 567 Gene3D Transferase(Phosphotransferase) domain 1 146 360 - -
Mibi07g0074 567 Pfam EF-hand domain pair 412 459 IPR002048 GO:0005509
Mibi07g0074 567 Pfam EF-hand domain pair 470 534 IPR002048 GO:0005509
Mibi07g0074 567 ProSitePatterns EF-hand calcium-binding domain. 517 529 IPR018247 -
Mibi07g0074 567 ProSiteProfiles EF-hand calcium-binding domain profile. 467 502 IPR002048 GO:0005509
Mibi07g0074 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Mibi07g0074 567 ProSitePatterns EF-hand calcium-binding domain. 480 492 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0074 Mibi-ChrMibi07 1268184 1270495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0074 1 559 EF-hand Containing Proteins AT2G31500 63.668 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mibi07g0074 Pkinase 8.6e-73 CL0016