Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0056 ATGGGATTCTCAGTAAGACATTTCTTGATCTCCCACTTCTTGGATGTGAACCCGTGGCAACCTCCTCGGATTTTCTTTGCCATTTCGGTTTTTTTGTCGTGTTCATGCTGGTCTGTTTCGGGTTTGGGTTCCATGTCTTCCATTGCCATCTCTTATGGGGAAAAAGGTTCTGTCTTTTGTGGTCTGAGATCAGATGGGTCTCATACTGTGAACTGTTACGGATCAAACTCAGCCATAGTCTATGGAATACCAACCCATTTCCCACTTCTGGGTCTAACAGCCGGTGATGGCTTTGTCTGTGGGCTCCTAATGGATACTTTCCAACCATATTGTTGGGGCAGCAGTGGCTATGTCGAAATGGGTGTTCCACAACCTATGACTGAAGGAGCAGAGTATCTAGAAATCAGTGCTGGGGATTATCATGTTTGTGGATTAAGGAAGCCCTTGACGGGAAGACAGAGGAATATTTCTCTTGTCGATTGTTGGGGTTACAACATGACGCAGAACTACGTTTTTGATGGCCAGATTCAATCTATCTCGGCAGGTTCTGAATTCAACTGTGGGTTATTTTCCCAGAACAGGACAGCCTTCTGCTGGGGTGATGATACTAGTAGCAGAGTAATCAGTTTAGTTCCTAAAGGTAAGCAGTTCCAGAAGATTTCTGCAGGTGGATTTCATGTGTGTGGAATTTTAGAAGGGGTGAATTCCAGAACTATCTGTTGGGGAAGGAGCTTGGGCATGGAGGAAGAGATTTCTGTGAAGCGTCCTGGTGAAGGCAACGTTGATTTGGCTCCAAATGAGCCTATGCTTTCTGTTGTAGGGGGAAGATTTCATGCTTGTGGCATCAAAACTTATGATCATGGGGTGATTTGCTGGGGATTTACTATCAAGGGAAGCACCCCAGTTCCTAGTGGAGTTAAGGTATTCGATATTGCTGCTGGAAATTATTTTACTTGTGGAATACTTGCTCAGAAGTCTCTTCTTCCTTCTTGTTGGGGTGTTGGCTTCCCTACTTCTCTACCATTAGCTGCCTCTCCTGGATTATGCCAGCCCAATCCATGTCCTCCTGGTTTCTATGAAATTGAACAGCAAAAGGGTCTCTGCAAGTCCTCGGATTCTCGCTTTTGCATGCCATGCAGTGGAGCTTGTCCTATTGACATGTATCAGAGAAGTGAGTGCAATTATACATCTGACAGACAATGTGAATACAATTGTTCTACTTGTTCCTCCCCTGAATGCTTCTCCAATTGCTCCGTTTCAGATTCCAATGCTAACTCGGGGAAGAAAGATGACAAGTTTTGGTCTTTACAGTTGCCAGTGATGATTGCTGAGATTGCTTTCGCAGTCTTCTTTGTTAGTCTTGTGACCTTAACTTCTGTTCTATATGTTCGCTACAAGCTACGAGGTTGTCAGTGTTCCATAGAAGGATCAAACGTGAAGAAACTTCATGGCAGTAACTCTTCCCTCCAAAAAGAGAACAGCAAGATCAGTCCAGACTTAGAGGAGCTCAAGATAAGGAGGGCTCAAACATTTACTTATGAGGAACTTGAAAGAGCAACAGGTGGGTTCAAAGAAGAATCCATAGTTGGTAAAGGAAGCTTTTCTTGTGTATTCAAAGGAGTATTGAAAGATGGGACTGTTGTAGCAGTTAAAAGGGCCATAATGTCTCCCAACATGCAAAAGAATTCCAAAGAGTTTCACACAGAGCTTGACTTGCTCTCCAGGCTGAACCATGCCCATTTACTCAACCTGCTTGGTTATTGTGAAGAAGGTGGAGAAAGGCTTCTTGTTTATGAGTTCATGGCTCATGGCTCCTTGCACCAACACCTCCATGGGAAAAACAAGGCCTCCAAAGAGCAGTTAGATTGGGTTAGAAGGGTAACAATTGCAGTTCAAGCAGCAAGAGGAATTGAATATTTACATGGCTATGCTTGCCCACCTGTGATTCACAGAGACATCAAATCTTCAAACATCCTCATTGATGAAGAACACAATGCTAGAGTTTCTGATTTTGGCTTGTCATTACTGGGTCCTGCTGATAGTAGCTCTCCTTTGGCTGAACTACCTGCCGGCACTCTTGGCTATCTCGATCCTGAATATTACAGACTTCATTACCTTACCACAAAATCCGATGTATATAGCTTTGGGGTATTGCTCTTGGAAATTCTGAGTGGTAGAAAAGCCATTGACATGCAATATGAAGAAGGTAACATAGTTGAATGGGCTGTGCCTTTGATTAAAGCAGGGGATATTACTGCAATTTTGGACCCAGCTCTAAAACCTCCTTCTGACCTTGAAGCCTTGAAAAGGATTGCAAATGTGGCCTGCAAATGTGTGAGGATGAGAGGGAAAGAAAGGCCATCAATGGACAAAGTGACAACTGCTTTGGAGAGAGCTCTTGCACAACTAATGGGTAGCCCAAGCAATGAACAGCCAATTTTGCCAACCGAGGTGGTGTTGGGAAGTAACAGATTACACAAGAAATCATCTCAGAGATCTTCCAACAAGTCAACTTCAGAAACTGACGTGGGAGAAGTTGAGGATCAAGGGTTTGAGTTCAGGGCACCGTCATGGATAACTTTTCCGAGTGTCACTTCTTCTCAAAGAAGGAAGTCGTCGGTATCTGAAGGGGATGTGGAGGGGAAGAATCCAGAAGTGAAGAACTTGGGGAATGTGGTTGGTGGTGGTGGTGATGTTTTGAGGAGTCTAGAGGAAGAGATTGGACCTGCTTCTCCTCAAGAGAGACTGTTTTTGCAGCACAACTTCTGA 2769 0.4417 MGFSVRHFLISHFLDVNPWQPPRIFFAISVFLSCSCWSVSGLGSMSSIAISYGEKGSVFCGLRSDGSHTVNCYGSNSAIVYGIPTHFPLLGLTAGDGFVCGLLMDTFQPYCWGSSGYVEMGVPQPMTEGAEYLEISAGDYHVCGLRKPLTGRQRNISLVDCWGYNMTQNYVFDGQIQSISAGSEFNCGLFSQNRTAFCWGDDTSSRVISLVPKGKQFQKISAGGFHVCGILEGVNSRTICWGRSLGMEEEISVKRPGEGNVDLAPNEPMLSVVGGRFHACGIKTYDHGVICWGFTIKGSTPVPSGVKVFDIAAGNYFTCGILAQKSLLPSCWGVGFPTSLPLAASPGLCQPNPCPPGFYEIEQQKGLCKSSDSRFCMPCSGACPIDMYQRSECNYTSDRQCEYNCSTCSSPECFSNCSVSDSNANSGKKDDKFWSLQLPVMIAEIAFAVFFVSLVTLTSVLYVRYKLRGCQCSIEGSNVKKLHGSNSSLQKENSKISPDLEELKIRRAQTFTYEELERATGGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGKNKASKEQLDWVRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVSDFGLSLLGPADSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKAGDITAILDPALKPPSDLEALKRIANVACKCVRMRGKERPSMDKVTTALERALAQLMGSPSNEQPILPTEVVLGSNRLHKKSSQRSSNKSTSETDVGEVEDQGFEFRAPSWITFPSVTSSQRRKSSVSEGDVEGKNPEVKNLGNVVGGGGDVLRSLEEEIGPASPQERLFLQHNF 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0056 922 SUPERFAMILY Protein kinase-like (PK-like) 502 796 IPR011009 -
Mibi07g0056 922 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Mibi07g0056 922 FunFam Receptor protein kinase CRINKLY4 601 803 - -
Mibi07g0056 922 Gene3D Transferase(Phosphotransferase) domain 1 601 811 - -
Mibi07g0056 922 ProSiteProfiles Protein kinase domain profile. 523 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0056 922 Gene3D Phosphorylase Kinase; domain 1 493 600 - -
Mibi07g0056 922 FunFam Serine/threonine-protein kinase-like protein CR4 41 208 - -
Mibi07g0056 922 MobiDBLite consensus disorder prediction 822 847 - -
Mibi07g0056 922 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Mibi07g0056 922 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 27 922 - -
Mibi07g0056 922 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Mibi07g0056 922 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 353 401 IPR001368 GO:0005515
Mibi07g0056 922 MobiDBLite consensus disorder prediction 864 894 - -
Mibi07g0056 922 MobiDBLite consensus disorder prediction 823 840 - -
Mibi07g0056 922 FunFam serine/threonine-protein kinase-like protein CCR1 493 600 - -
Mibi07g0056 922 Pfam Protein tyrosine and serine/threonine kinase 526 795 IPR001245 GO:0004672|GO:0006468
Mibi07g0056 922 SMART serkin_6 523 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0056 922 CDD STKc_IRAK 529 798 - -
Mibi07g0056 922 SUPERFAMILY RCC1/BLIP-II 42 295 IPR009091 -
Mibi07g0056 922 Gene3D - 91 342 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0056 Mibi-ChrMibi07 1088991 1091759 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0056 28 922 Receptor kinase-like Gene Family AT3G59420 68.992 0.0 1263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mibi07g0056 PK_Tyr_Ser-Thr 1.2e-44 CL0016