Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0030 ATGGAATACCCTTCTTCTCACAAGGGAAAAGACAGTGAATACTGGAGTTCTCCACAAGCCCAGGTGGAGGAACCAGCATCACTAGATGAGAACACAAAAAAATCAATTTCAGAGGATATGCTTAGCACCTTCTCTGAGCTCATAAATTTTGATGCTTATGCTGGTTGGTGCAATAGCCCATCAACCACTGATCGGGTTTTAGCTAATGGGCTTTCATCATCTGCCTCAGTGCCATATGCATCACTTGATGAATTCAATTTAATGGGGGAGAGCTGTGGGTCATTCTTGGCTAGTGATGTTAATAAGAATTACAACATGACCAGAAGTTTCCCCAACTCTGGAGAGAAAGTTGCGTTTCAGCAGATGGAGGCCCAACTTGAGTTATCTGATGGCGGAAATGATGCTGGGAACTTAAACTATAAACATCATCGTAATGAATCTTTTGAAGAACTTGGTAGCATAGCGACGAGCAATTATATAGTTTCTAAGCCAACTGGTTGGTCATTAGATGAGAGAATGCTGTGGGCCTTGTCCCTTTTCAAGGAATCTGCTGGTGGGGGAATCTTGGCACAAGTTTGGGTACCAATTAAGCATGGAGATCAATTCGTCTTAACCACAAGTGATCAACCCTATTTGCTTGACCAAATGCTTGCAGGCTATCGTGAAGTGTCAAGGACATTCACATTCTCAGCAGAAGGAAGGCCAGGCTCTGTCTTAGGACTCCCTGGTCGTGTCTTTATCTCTAGAGTTCCTGAGTGGACATCCAATGTTGGTTACTACACTAAGGCTGAATATTTGAGGATTGAGCATGCGATTAATCACAAGGTTTGTGGATCAATCGCAGTTCCAGTGTTTGATCTTTATTCTGAAACGCCATGCTGTGCTGTTCTGGAACTTGCCACTACAAAGGAAAAGACTGATTTTGATAGAGAATTGGAAATTCTTTGCCAAGCACTCAAGGTTGTGAATTTAAGGACTACTGTAACTCCCCGACTTCTTCCCCAGAGCCTCTCAAGTAAGAAAAGAGCTGCTTTAATGGAGATAATTGATGTGTTACGGGCTGTATGTCATGCACATAGTTTGCCTCTGGCATTGACATGGATTCCCTGTTGTTACTTGAAGGGAATTGACAACGAAACTATGAGAGCACTAAATAAGGAGGTTCATTCAAGTTCTAATGATATACATGTATTATGCATCGAAGAATCAGCTTGCTATATTAATGATAGGAAGATGGAAGGGTTTGTTCATGCATGTGTTGAGCATCATCTTGAGGAAGGGCAGGGTACAGCTGGCAAAGCTATTCAGTCAAATCAGCCATTCTTCTATCCTGATGTCAAGGCATATGATGTTGGTGAATATCCACTTGTTCAACATGCACGAAGATACAATTTGAATGCAGCTGTTGCTATCAGGCTAAGGAGTACCTTCACTAATGATGATGATTACATTTTAGAATTTTTTCTACCTGTCAATATGAGAGGTAGTTCAGAGCAGCAACTTCTATTGGACAATCTTTCGGGCACCATGCAGAGAATTTGTAAGAGCTTAAGGACTGTTACTGATGCTGAATTATCAGGAAAATCAGGGTCACTGGTAAATCTTGAAAATGAAGAAGTACGAGATTTTTTTCCTATATCTAGGAGAAACTCTAAAATAGGATTGATGGATGTTGACCAGGACTCAGTCAGCAAGATTTCATTGCACGCTTGCAACTTGAGAAACAATGGAATTGAAGCTACTTATAACCAGGAAATGAATAGGTCAAAAAGGCCGGTTGAGAAAAAGAGAAGCACAGGTGAGAAGAATGTCAGCTTGAGAGTTCTACAGCAATACTTCTCTGGTAGTCTAAAGGATGCTGCGAAGAGCATTGGTGTTTGTCCTACAACTCTGAAACGGATATGCAGGCAACATGGCATTTCTAGATGGCCATCCCGTAAAATAAATAAAGTGAATCGTTCATTAAAGAAAATCCAGACTGTGCTTGATTCTGTTCAGGGAGTGGAAGGAGGGCTAAAGTTCGACCCTTCTACTGGGGGGTTTGTGGCAGGAGGTTCAATCATTCAAGAATTTGATGCACATGGTAGGCTTTTGTTCTCTGAGAAGAGTATGCCTGTACAAGATCCTGAGTGCGTTGCAAAATATACAGTCTCAGTGCCTACTGTACCTTATGGTGAAAGAGAGAATTCGGCTATTAAGTTGGAAGATAATGATGTTTGTTTGGTTGATAACCAGCTTGTGTGCTCACAAGGTGTAATTGTACCAAAGTCTGGTGAGGGAGCATTGAAGAATGCCAAAGGTTTTGTTGGTTTTAGTCGAGATTCAAAATCAATGGCCTTAGATGATGGATCATGCCAGATGGTCAAGTCTCAGGGTTGTCCTGAGCAAGCATGTCTTGGTCCAGTTGCTACAAAAGATGGAAACGCATGGGGGCTGAACAAGGATGGTCAGGGTGCAAAAAATTCTGGTCCTGATATTGTCTCTTGGAGTTCAAGCTCTCTGGTTGCTGATGACATGGAAAATATCGTGGATGGGGACAATCAGACTGTTGAACACAGCCAACCTACTTCTTCAAACTTGACAGACTCATCCAACGGTTCTGGTTCAATGATCCATGGCAGTTCGTCTGGTGCTCAAAGCTCTGAGAATCCGAAGCATTCCAAAGTCAAATCAACGCTTGTTGACGGTGGATCAAAAATTATTGTGAAAGCCACCTATAAAGATGATACTGTACGCTTCAGGTTTGACCCATCTGCAGGTTGTTTCCAACTATACGAAGAAGTAGCAACAAGATTCAAATTACAAAATGGGTCGTTCCAGCTTAAATATCTAGATGATGAAGAGGAATGGGTGATGTTGGTAAATGACTCAGATTTGCAAGAGTGCATAGAAATATTGGAAGATATGGGCACAAGTTGTGCGAAGTTCCTTGTTCGTGATATACCTTTCTTCTTAAGCAGCTCTGGTAGCAGCAGTTGCTTCTTGGAAGGCTCTTAG 2997 0.4191 MEYPSSHKGKDSEYWSSPQAQVEEPASLDENTKKSISEDMLSTFSELINFDAYAGWCNSPSTTDRVLANGLSSSASVPYASLDEFNLMGESCGSFLASDVNKNYNMTRSFPNSGEKVAFQQMEAQLELSDGGNDAGNLNYKHHRNESFEELGSIATSNYIVSKPTGWSLDERMLWALSLFKESAGGGILAQVWVPIKHGDQFVLTTSDQPYLLDQMLAGYREVSRTFTFSAEGRPGSVLGLPGRVFISRVPEWTSNVGYYTKAEYLRIEHAINHKVCGSIAVPVFDLYSETPCCAVLELATTKEKTDFDRELEILCQALKVVNLRTTVTPRLLPQSLSSKKRAALMEIIDVLRAVCHAHSLPLALTWIPCCYLKGIDNETMRALNKEVHSSSNDIHVLCIEESACYINDRKMEGFVHACVEHHLEEGQGTAGKAIQSNQPFFYPDVKAYDVGEYPLVQHARRYNLNAAVAIRLRSTFTNDDDYILEFFLPVNMRGSSEQQLLLDNLSGTMQRICKSLRTVTDAELSGKSGSLVNLENEEVRDFFPISRRNSKIGLMDVDQDSVSKISLHACNLRNNGIEATYNQEMNRSKRPVEKKRSTGEKNVSLRVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTVLDSVQGVEGGLKFDPSTGGFVAGGSIIQEFDAHGRLLFSEKSMPVQDPECVAKYTVSVPTVPYGERENSAIKLEDNDVCLVDNQLVCSQGVIVPKSGEGALKNAKGFVGFSRDSKSMALDDGSCQMVKSQGCPEQACLGPVATKDGNAWGLNKDGQGAKNSGPDIVSWSSSSLVADDMENIVDGDNQTVEHSQPTSSNLTDSSNGSGSMIHGSSSGAQSSENPKHSKVKSTLVDGGSKIIVKATYKDDTVRFRFDPSAGCFQLYEEVATRFKLQNGSFQLKYLDDEEEWVMLVNDSDLQECIEILEDMGTSCAKFLVRDIPFFLSSSGSSSCFLEGS 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0030 998 MobiDBLite consensus disorder prediction 847 887 - -
Mibi07g0030 998 SUPERFAMILY CAD & PB1 domains 895 981 - -
Mibi07g0030 998 MobiDBLite consensus disorder prediction 1 33 - -
Mibi07g0030 998 SMART PB1_new 899 981 IPR000270 GO:0005515
Mibi07g0030 998 Pfam RWP-RK domain 603 651 IPR003035 -
Mibi07g0030 998 ProSiteProfiles RWP-RK domain profile. 584 671 IPR003035 -
Mibi07g0030 998 CDD PB1_NLP 900 980 IPR034891 -
Mibi07g0030 998 PANTHER PROTEIN NLP8 109 992 IPR045012 GO:0003700
Mibi07g0030 998 Pfam PB1 domain 902 979 IPR000270 GO:0005515
Mibi07g0030 998 MobiDBLite consensus disorder prediction 10 26 - -
Mibi07g0030 998 MobiDBLite consensus disorder prediction 847 891 - -
Mibi07g0030 998 Gene3D - 896 979 - -
Mibi07g0030 998 ProSiteProfiles PB1 domain profile. 899 981 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0030 Mibi-ChrMibi07 829935 834604 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0030 1 995 NLP Transcription Factor Family AT2G43500 47.463 0.0 817
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mibi07g0030 PB1 1.6e-16 CL0072