Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0013 ATGACCCTGCAATTCTTGATCAGTCATTTCCATTGTGCGATTATGAACCCCTACATGATCGATTTGGCCCTGGATTTCCTGGTTCCGTCTTTGTGGGAGATCAAAGTTACAGTGGCCACCTCCGTGTTTGTGATAATCGCCTATTGGTTTTTCACGTACAGAACTGGAGACTTTGATGTTGATCGAGTACTTGTTGACAATTCCGCGGAAGTTCCTGACGACAAAGACAAGATGGCCCAGTTTAAAGGAGATTCTCAGACCAATTCGGCATATTTGATTAAGTTGGAACTTTTGGCTGCTAAGAATCTTATTGGTGCAAATCTAAATGGCACGTCAGATCCTTATGCTATCATTACATGTGGCAATGAGAAGCGATTCAGTTCCATGGTTCCTGGTTCAAGAAATCCTATGTGGGGTGAGGAATTCAATTTCTCTGTTGATGAACTTCCTGTCCAGATTAACATTACGATATATGATTGGGATATTATTTGGAAAAGTGCTGTTCTAGGTTCAGTGACTGTTCCAGTTGAAAGCGTAGGTCAAACTGGTGCAGTATGGCATACATTAGATAGTCCATCGGGGCAGGTTTGCCTTCATATTAAAGCAAGAAAACTGACTGCAAATTCGTCCAGGATGAATGGGTACGGCGGACCCAACCCTCGAAGAAGGATGCCTACGGAAGAGCAAGGGCCAACTGTTGTTCATCAAAAGCCGGGACCTCTTCAGACGATATTTAATCTTCTTCCAGATGAGGTTGTTGAACATAGTTACTCTTGTGCACTTGAGAGGTCATTTCTGTATCATGGTCGTATGTATGTCTCAGCATGGCATATTTGCTTCCATTCTAATGTATTCTCAAAGCAAATGAAGGTGGTTATTCCTTTTGAGGATATAGATGAGATTCGAAGGAGTCAGCATGCATTTATTAATCCTTCTATAACAATTATTCTTCGCATGGGTGCGGGTGGACATGGTGTACCTCCTTTGGGAAGTCCTGATGGTAGAGTAAGGTATAAATTTGCGTCATTTTGGAATAGAAATCATACATTTAGAAATTTACAACGTGCAGCAAAGATTTTCCGTGAAATGCTGGAAGCTGAGAAGAAGGAAAACGCAGAGTCAGAATTGCGTGCACATAGCAGTTCTGTTAGGGGAAATAAGACACCGGATAAGGTACCTGAAGAAAGCATGAGAAAAACCGGAAAGTCTCAACCTTTTGTCAAAGAAGAGCCTTTGGTTGGTATATATAATGATGTTTTCCCTTCCAAGGCTGAGCAGTTCTTTAACTTGTTATTTAAAGATGACTCAAAATTTACCAGTGAGTATCGTTCAGTACGAAAGGATTCTAATCTAGTGATGGGACAGTGGCATACAGCAGATGAATATGATGGTCAAGTCAGAGAGATAACCTTCAGATCTCTTTGTAACAGTCCTATGTGCCCTCCAGACACTGCCATGACAGAGTGGCAGCATGTTGTTCTATCGCCAGACAAGAAAAAATTGGTGTTTGAAACCGTCCAACAGGCACATGATGTACCATTTGGGTCCTATTTCGAGGTGCATTGTAAATGGAGTTTGGAGACAATTAATGAAAGTTCAAGTTCATTGGACATAAAAGTGGGTGCGCACTTTAAGAAATGGTGTGTTATGCAATCTAAAATCAAGGCAGGGGCAGTTAACGAGTACAAGAAAGAAGTTGATGTGATGTTAGAAGTTGCCCGATCTTATGCAAAGAACAACGCTTCTGGTGGTGAGATTGACACGGCGGTTTCACCCCCTGCAACTTCTGACAGCCTCTAA 1800 0.4189 MTLQFLISHFHCAIMNPYMIDLALDFLVPSLWEIKVTVATSVFVIIAYWFFTYRTGDFDVDRVLVDNSAEVPDDKDKMAQFKGDSQTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGNEKRFSSMVPGSRNPMWGEEFNFSVDELPVQINITIYDWDIIWKSAVLGSVTVPVESVGQTGAVWHTLDSPSGQVCLHIKARKLTANSSRMNGYGGPNPRRRMPTEEQGPTVVHQKPGPLQTIFNLLPDEVVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVVIPFEDIDEIRRSQHAFINPSITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRNHTFRNLQRAAKIFREMLEAEKKENAESELRAHSSSVRGNKTPDKVPEESMRKTGKSQPFVKEEPLVGIYNDVFPSKAEQFFNLLFKDDSKFTSEYRSVRKDSNLVMGQWHTADEYDGQVREITFRSLCNSPMCPPDTAMTEWQHVVLSPDKKKLVFETVQQAHDVPFGSYFEVHCKWSLETINESSSSLDIKVGAHFKKWCVMQSKIKAGAVNEYKKEVDVMLEVARSYAKNNASGGEIDTAVSPPATSDSL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0013 599 MobiDBLite consensus disorder prediction 388 403 - -
Mibi07g0013 599 MobiDBLite consensus disorder prediction 209 235 - -
Mibi07g0013 599 MobiDBLite consensus disorder prediction 371 403 - -
Mibi07g0013 599 PRINTS C2 domain signature 153 161 IPR000008 -
Mibi07g0013 599 PRINTS C2 domain signature 132 145 IPR000008 -
Mibi07g0013 599 PRINTS C2 domain signature 108 120 IPR000008 -
Mibi07g0013 599 Pfam GRAM domain 242 314 IPR004182 -
Mibi07g0013 599 SMART C2_3c 92 188 IPR000008 -
Mibi07g0013 599 Gene3D - 240 358 IPR011993 -
Mibi07g0013 599 ProSiteProfiles VASt domain profile. 411 581 IPR031968 -
Mibi07g0013 599 Gene3D C2 domain 77 203 IPR035892 -
Mibi07g0013 599 FunFam BAG-associated GRAM protein 1 isoform X2 240 359 - -
Mibi07g0013 599 Coils Coil 350 370 - -
Mibi07g0013 599 CDD PH-GRAM_C2-GRAM 250 358 - -
Mibi07g0013 599 CDD C2 93 189 - -
Mibi07g0013 599 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 19 591 IPR044655 -
Mibi07g0013 599 ProSiteProfiles C2 domain profile. 72 189 IPR000008 -
Mibi07g0013 599 Pfam VAD1 Analog of StAR-related lipid transfer domain 415 560 IPR031968 -
Mibi07g0013 599 Pfam C2 domain 94 184 IPR000008 -
Mibi07g0013 599 SMART gram2001c 239 305 IPR004182 -
Mibi07g0013 599 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 91 201 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0013 Mibi-ChrMibi07 660331 668313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0013 60 177 C2H2 Transcription Factor Family AT4G21160 24.576 1.91e-06 48.5