Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2909 ATGTTGAAGCTGTCTCGATTGTTCGCTTCCAGGCATCAGGTATCAGAAACACTGTTATCTCAGAAAGCTGATCTTAGAGACAGTATATGGCTTCTGTGTAGCTCTACTACCCATTCAGCTGGCATTTCTACTGCCACGAATAATTATTCTGCGAAAGGATATACTTCAAGTCAAATATTTGTTCCATATTCTGTTTTTAAAGGCAAAGCTGCACTCTCTCTGAGTCCCCGACTTCCAACTTTCACTAAGTTGAATTCTGGGGCCGTTGTAATCGATCGCCGTGGTTCAGTGATGATGACTTTTGTACCTGCTCTTGGTGAGCGCAAGTATGACTGGGAGAAGAAACAGAGATTCGCTCTCTCAGCAACGGAGGTCGGTTCTTTGATAAGCATGGGCCCCTCAGATTCCTGTGAATTCTTTCATGACCCTGCAATGTTATCAAGTAATGCTGGTCAAGTCAGGAAGAGTTTATCAATTAAGCCACATGCAGACAGCTCTGGCTACTTTATGTCTTTGTCTGTTGTCAACAATATTTTGAAAACCAAAGAATACTTGACGGTTCCGGTCACAACTGCTGAGTTTGCTGTGATGAGGACTGCTTGCAGCTTTGCATTGCCGCACATTATGGGTTGGGATCGTCTGACTCATGATCAGTCCGGAGGCATGCCTGGTCATCAATCAAAAGTGGACCCGCAAGTTCTAGACTTGGAATGGTCAAAGTGA 723 0.444 MLKLSRLFASRHQVSETLLSQKADLRDSIWLLCSSTTHSAGISTATNNYSAKGYTSSQIFVPYSVFKGKAALSLSPRLPTFTKLNSGAVVIDRRGSVMMTFVPALGERKYDWEKKQRFALSATEVGSLISMGPSDSCEFFHDPAMLSSNAGQVRKSLSIKPHADSSGYFMSLSVVNNILKTKEYLTVPVTTAEFAVMRTACSFALPHIMGWDRLTHDQSGGMPGHQSKVDPQVLDLEWSK 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2909 240 Pfam Whirly transcription factor 65 199 IPR013742 GO:0003697|GO:0006355|GO:0006952
Mibi06g2909 240 Gene3D Transcriptional Coactivator Pc4; Chain A 50 220 IPR009044 GO:0003677|GO:0006355
Mibi06g2909 240 SUPERFAMILY ssDNA-binding transcriptional regulator domain 57 222 IPR009044 GO:0003677|GO:0006355
Mibi06g2909 240 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 21 240 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2909 Mibi-ChrMibi06 48614610 48617636 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2909 56 240 Whirly Transcription Factor Family AT1G71260 69.841 1.96e-93 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Mibi06g2909 Whirly 2.9e-57 CL0609