Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2890 ATGGCGTCTTCCCAATTCTCCCACTCCAACGCTTCTTCTTCTTCTTCATATTTCCCCGTCCCCTTTCACCTTCAGCAATCCCCATATGTGGCAGTGGCGCCTTTGTATCCTCTACCACAGTATCAGCAGGCTCAGCAACTATTTCAAAGGGATGCCCAGACAATCACACCTGAGGCTCTTGAGAGTGTCAAGGCGGCCTTTGCAAACAGTGAGATTGACCTTAAGGCGGAGACCAAAACGAAAGCAGTTCCTCGCAAAGCTGCAGGCCAAACATGGGAGGATCCCACTCTTGCAGATTGGCCAGAAAATGATTATAGGCTCTTTTGTGGTGATCTTGGTAATGAGGTGAATGATGATGTTCTTTCGAAAGCATTTTCTCGATTTCCTTCCTTTAACATGGCAAGAGTTGTCAGAGACAAGCGGACCGGAAAAACAAAAGGTTATGGTTTTGTAAGCTTTGCCAATCCTGCTGACCTTGCTGCTGCTCTTAAAGAAATGAATGGTAAATATGTTGGAAACCGGCCAATTAAGCTTCGCAAGAGTAAGTGGCAGGAGAGGATAGATTATGAGGCCCTGGAAAAACAGAAGAAATTGAAATTTCCCAGGAAGAGTGTCCTGCACAAGTAA 627 0.4577 MASSQFSHSNASSSSSYFPVPFHLQQSPYVAVAPLYPLPQYQQAQQLFQRDAQTITPEALESVKAAFANSEIDLKAETKTKAVPRKAAGQTWEDPTLADWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFANPADLAAALKEMNGKYVGNRPIKLRKSKWQERIDYEALEKQKKLKFPRKSVLHK 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2890 208 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 35 185 - -
Mibi06g2890 208 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 105 183 IPR000504 GO:0003723
Mibi06g2890 208 SUPERFAMILY RNA-binding domain, RBD 87 183 IPR035979 GO:0003676
Mibi06g2890 208 FunFam RNA-binding protein 42 40 190 - -
Mibi06g2890 208 SMART rrm1_1 106 179 IPR000504 GO:0003723
Mibi06g2890 208 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 107 177 IPR000504 GO:0003723
Mibi06g2890 208 CDD RRM_RBM42 99 181 IPR034215 -
Mibi06g2890 208 Gene3D - 36 191 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2890 Mibi-ChrMibi06 48408945 48415462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2890 107 207 Eukaryotic Initiation Factors Gene Family AT1G22760 32.039 5.16e-11 59.3