Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2882 ATGTTTGCACGAGACCACCTGCAAAAGAAAAAAAGGCACTCTGTAATGTACTATGTCGATAAATTCGTATGTCATGGGACACGTGAGAATATTATTGTAGGTTCTCACGTATGGGTTGAAGATCCAGATGAATCTTGGATTGATGGACAGGTATCAAAAATCACTGGAAATGATGCTGAAATTGAAACTACCGATGGAAAAAAGGTTGTGGCAAATTTATCAAAATTATATCCCAAAGACATGGAAGCTCCTGCTGGCGGAGTGGATGACATGACTAAGCTGTCCTATTTACACGAGCCTGGGGTCCTGCAGAACTTAAAATCCAGATATGAATTGAATGAAATATATACTTATACTGGAAATATTTTAATTGCGATAAATCCATTCCAAAGACTACCTCATATCTATGATGCTCACATGATGCAACAATATAAGGGAGCACCATTTGGGGAGCTAAGTCCTCACGTGTTTGCAGTTGCTGATGTTGCATATAGGGCAATGATTAATGAAGGAAAAAGCAATTCAATCCTTGTCAGTGGAGAAAGTGGAGCTGGTAAAACTGAAACTACCAAAATGCTCATGAGATACCTTGCTTTCCTAGGTGGTAGGGCTGCTGCTACTGAAGGAAGAACAGTTGAGCAACAAGTTCTTGAATCAAATCCGGTTCTTGAAGCATTTGGCAATGCAAAAACAGTTAGGAATAACAACTCCAGCCGTTTTGGAAAATTTGTCGAGATTCAATTTGATAAAAGTGGAAGAATCTCAGGAGCAGCAATTCGAACTTACCTTCTGGAGAGGTCTCGAGTTTGCCAAATCAATGATCCTGAACGAAACTACCACTGCTTCTATCTTCTTTGTGCTGCACCACAGGAGGAACTAGAGAGATACAAATTAGGACCTCCTAAATCATTTCATTACCTGAACCAGTCAAATTGTTATGAACTGGCTGATTCAAGTGATTCTCGTGAGTATCTTGCCACCAGGAGAGCCATGGATATCGTTGGAATAAACCAAAAGGACCAGGAAGCAATTTTCAGAGTTGTTGCTGCTATTCTTCATCTTGGTAATATTGCTTTTGCCAAAGGAAAAGAAATTGACTCATCAATTCCCAAAGATGACAAAGCCAAATTCCACCTGGCTACAGCTGCCGAGCTTCTCATGTGTAACGCCGATGCCTTGGAAGATGCTTTATGTAAACGTGTTATGGTCACCCCTGAAGAAGTTATAAAGCGAAGTCTTGATCCCCAAAGTGCAGCAATAAGTAGAGATGGCTTGGCTAAAACAATTTATTCTCGGCTATTTGACTGGTTGGTGGACAAGATTAATAGTTCAATTGGACAAGATCCTGATTCCAAATCTTTGATTGGAGTCCTTGATATCTATGGTTTTGAAAGCTTTAAAACTAACAGTTTTGAGCAGTTTTGCATTAATTTCACAAATGAGAAGTTGCAGCAGCATTTCAATCAGCACGTCTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAGATTGATTGGAGCTATATTGAATTTGTTGATAATCAAGATGTTCTGGATCTCATTGAAAAGAAACCTGGAGGAATCATTGCTCTCCTCGATGAAGCTTGCATGTTTCCTAAGTCAACACACGAAACATTTGCTAACAAGCTTTATCAAACATTCAAGAATAACAAGCGCTTTGTAAAGCCAAAATTATCTCGATCAGATTTCACAATTGCTCATTATGCTGGGGAGGTCTTATACCAGTCCAATCAGTTTTTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTGTTGGGTGCTTCCAAATGTTCCTTTGTAGCAGAACTTTTTCCCCCGCTTCCAGAAGAGACATCTAAATCTTCCAAATTTTCTTCAATTGCATCTCGTTTCAAGCTACAACTACAATCATTAATGGAAACACTAAACTCTACAGAGCCTCATTACATCAGATGTGTGAAACCAAACAACCTTCTCAAGCCTGCAATATTTGAGAATGCCAACATTATGCAACAACTTCGCTGTGGTGGTGTTCTAGAGGCAATCAGAATCAGTTGTGCTGGCTATCCTACTCGCCGTCCTTTCTTTGAATTTGTAAATCGATTTGGCCTCCTTGCCCCAGAGGCCATGGAAGGCAACATCGAAGAAAAAGTTGCTTGCCAAAAGATTCTGGAAAAGATGGGGCTAAAGGGGTATCAGATTGGTAAAACAAAGGTATTCCTGCGAGCTGGTCAAATGGCTGAACTGGATGCACGGAGAGCTCAAGTACTCAGCAATGCGGCGAAAATTATCCAACGGCGCCTACGAACCCATCAGGCCCGTAATCATTATCTTTCTTTGCGACTGGTTACCATATACATGCAGTCTGTGTGTAGAGGAAGGCTAGCATGCAAACTCTTTGACAGCATGAGAAAGGTGGCTGCTGCTAAGAAAATTCAGAAGAATGTACGCGGATATGAAGCTAGGAAGGCCTATAAAAGACTCCATGCAACTGCACTTACCTTGCAAATGGGTTTAAAGGCAATGGCTGCACGCAAGGAATTCAGATTTAGGAAGCAGTCTAAAGCTGCCATTGCTATTCAGGCTCAGTGGCAATGCCAGAAAACTTCCTCATATTATAAAAGGCTCAAGAAAGCTTCAATAACTACACAATGCAGATGGAGAGGCCGTGTAGCAAGGAGGGAACTTAGGAAGCTAAAAATGGCTGCAAGAGAAACTGGTGCACTTCAAGAAGCAAAGGATAAGCTTGAAAAACGAGTGGAGGAACTCACTTGGCGTCTCCAATTAGAAAAAAGTTTAAGGACCAACCTAGAAGAAGCAAAAGCACAAGAGGCAGCAAAACTACAGAATTCATTGAAGGAAATGCAGACAAAAATTGATGAAACCAATGCCTTACTTGTCATAGAGCGAGAGAATGCAAAGAAAGCAGTTGAAGAAGCACTTCCTGTTATTCAGGAAACCCAGGTTCTTGTTGAAGACACACACAAAATTGAATCATTAACAGCAGAAGTTGAGAGCCTAAAGACCTCACTGGAGTCAGAAAAAGAGAGAGCAGATGACCTTGAAAGAAAATACAACGAAGCTCAAGCTTCTAGTGAAGAAAGGGGTACAAAATTAGAAGACACAGATAAGAAGGTTCGTCAGCTACAAGAATTATTGACCAGGCTAGAAGAGAAGATCACTAATTCAGAATCAGAGAATCGGGTTCTGCGTCAGCAAGCTGTGTCCATGGCACCTAATAAGTTCCCTTCAGGACGCACCAGATCTACTATTCAGAGGGGTGCTGAAGGTGATGTTCATGTCGGAGGGGAAGCAAAGCCACCTTTGACCCCGGATAACAATGATAACTTGGCGTACTGGTTATCCAATGCCTCCACACTTCTCTTGCTACTCCAGAGCACACTCAAGGCAAGTGGTGCCGCTGGAATGGCTCCACAACGCCGTCGTTCAGCCACACTATTTGGGAGGATGACACAAAGTTTCCGCGGAGCTCCACCTGGAGTGAACCTTGCGCTAATCCATGCGAGTGGAGGTGTAGATACATTGCGACAAGTTGAAGCCAAGTATCCAGCTCTTCTTTTCAAACAGCAGCTTACAGCATATGTGGAAAAGATATATGGAATGATTCGAGATAACCTGAAGAGAGAAATATCTCCCTTGCTTAGCTTATGCATCCAGGCACCGAAAACATCCAGAGCAAGCATTGTTAAAGGATCACGCTCTGTTGCAAACGCAGAAGCCCAGCGAGCTTTGATTGCTCACTGGCAAGCGATAGTGAAGAGCCTTGGCAACTTTCTCAATACCTTAAAATCAAATCATGTTCCTCCATTTTTAGTTCGGAAGGTGTTCACCCAAATGTTTTCTTTTATCAATGTCCAGCTATTCAACAGTCTTCTTTTAAGACGGGAGTGCTGCTCATTCAGCAATGGGGAATATGTAAAAGCTGGTCTGGCTGAATTGGAGCACTGGTGTTATAAAGCAACGGATGAGTATGCAGGTTTAGCCTATGAGGAGCTCAAACATATTAGGCAGGCTATTGGATTCCTGGTCATACATCAGAAACCAAAGAAAACGCTGAGTGAAGTAAGTCATGACCTGTGCCCGGTCCTCAGTATACAGCAGCTATATCGGATAAGTACCATGTACTGGGATGACAAATATGGCACTCATAGCTTGTCCGCCGATGTAATATCCAATATGAGAGTGCTCATGACTGAAGATTCAAACAATGCAGTCAGTAATTCTTTCCTGTTGGATGATGATTCCAGTATACCGTTTTCGGTTGATGACATATCAAAGTCGATGGAGCAAATAGATATCGCGGATATTGAACCACCACCGCTGATTCGAGAGAACTCTGGCTTTAGTTTCTTGTTGCCACGCATAGATTGA 4401 0.4188 MFARDHLQKKKRHSVMYYVDKFVCHGTRENIIVGSHVWVEDPDESWIDGQVSKITGNDAEIETTDGKKVVANLSKLYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKSRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRAAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEELERYKLGPPKSFHYLNQSNCYELADSSDSREYLATRRAMDIVGINQKDQEAIFRVVAAILHLGNIAFAKGKEIDSSIPKDDKAKFHLATAAELLMCNADALEDALCKRVMVTPEEVIKRSLDPQSAAISRDGLAKTIYSRLFDWLVDKINSSIGQDPDSKSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKNNKRFVKPKLSRSDFTIAHYAGEVLYQSNQFLDKNKDYVVPEHQDLLGASKCSFVAELFPPLPEETSKSSKFSSIASRFKLQLQSLMETLNSTEPHYIRCVKPNNLLKPAIFENANIMQQLRCGGVLEAIRISCAGYPTRRPFFEFVNRFGLLAPEAMEGNIEEKVACQKILEKMGLKGYQIGKTKVFLRAGQMAELDARRAQVLSNAAKIIQRRLRTHQARNHYLSLRLVTIYMQSVCRGRLACKLFDSMRKVAAAKKIQKNVRGYEARKAYKRLHATALTLQMGLKAMAARKEFRFRKQSKAAIAIQAQWQCQKTSSYYKRLKKASITTQCRWRGRVARRELRKLKMAARETGALQEAKDKLEKRVEELTWRLQLEKSLRTNLEEAKAQEAAKLQNSLKEMQTKIDETNALLVIERENAKKAVEEALPVIQETQVLVEDTHKIESLTAEVESLKTSLESEKERADDLERKYNEAQASSEERGTKLEDTDKKVRQLQELLTRLEEKITNSESENRVLRQQAVSMAPNKFPSGRTRSTIQRGAEGDVHVGGEAKPPLTPDNNDNLAYWLSNASTLLLLLQSTLKASGAAGMAPQRRRSATLFGRMTQSFRGAPPGVNLALIHASGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKREISPLLSLCIQAPKTSRASIVKGSRSVANAEAQRALIAHWQAIVKSLGNFLNTLKSNHVPPFLVRKVFTQMFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGLAYEELKHIRQAIGFLVIHQKPKKTLSEVSHDLCPVLSIQQLYRISTMYWDDKYGTHSLSADVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDIADIEPPPLIRENSGFSFLLPRID 1466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2882 1466 Pfam Myosin head (motor domain) 88 745 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi06g2882 1466 Gene3D - 464 648 - -
Mibi06g2882 1466 ProSiteProfiles IQ motif profile. 879 908 IPR000048 GO:0005515
Mibi06g2882 1466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 810 IPR027417 -
Mibi06g2882 1466 CDD MyosinXI_CBD 1114 1432 IPR037975 GO:0007015
Mibi06g2882 1466 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 32 81 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mibi06g2882 1466 CDD MYSc_Myo11 100 745 IPR036018 -
Mibi06g2882 1466 Gene3D - 277 335 - -
Mibi06g2882 1466 MobiDBLite consensus disorder prediction 1010 1045 - -
Mibi06g2882 1466 FunFam unconventional myosin-Va 762 809 - -
Mibi06g2882 1466 Pfam DIL domain 1285 1388 IPR002710 -
Mibi06g2882 1466 Coils Coil 1042 1076 - -
Mibi06g2882 1466 SMART MYSc_2a 81 758 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi06g2882 1466 PRINTS Myosin heavy chain signature 173 198 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi06g2882 1466 PRINTS Myosin heavy chain signature 116 135 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi06g2882 1466 PRINTS Myosin heavy chain signature 507 535 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi06g2882 1466 PRINTS Myosin heavy chain signature 221 248 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi06g2882 1466 PRINTS Myosin heavy chain signature 454 482 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi06g2882 1466 ProSiteProfiles IQ motif profile. 760 784 IPR000048 GO:0005515
Mibi06g2882 1466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 808 908 IPR027417 -
Mibi06g2882 1466 SMART DIL_2 1284 1391 IPR002710 -
Mibi06g2882 1466 Gene3D Kinesin motor domain 89 687 IPR036961 -
Mibi06g2882 1466 Gene3D - 692 755 - -
Mibi06g2882 1466 ProSiteProfiles IQ motif profile. 808 837 IPR000048 GO:0005515
Mibi06g2882 1466 FunFam unconventional myosin-Va 858 906 - -
Mibi06g2882 1466 Gene3D Myosin VI head, motor domain, U50 subdomain 337 626 - -
Mibi06g2882 1466 Coils Coil 1465 1466 - -
Mibi06g2882 1466 ProSiteProfiles Dilute domain profile. 1053 1409 IPR002710 -
Mibi06g2882 1466 ProSiteProfiles Myosin motor domain profile. 86 757 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi06g2882 1466 Coils Coil 1000 1034 - -
Mibi06g2882 1466 FunFam Class V myosin 464 600 - -
Mibi06g2882 1466 PANTHER MYOSIN 78 1397 - -
Mibi06g2882 1466 FunFam Myosin heavy chain 277 332 - -
Mibi06g2882 1466 Pfam Myosin N-terminal SH3-like domain 33 73 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mibi06g2882 1466 Gene3D - 858 907 - -
Mibi06g2882 1466 Gene3D - 759 810 - -
Mibi06g2882 1466 Gene3D - 811 857 - -
Mibi06g2882 1466 Coils Coil 902 975 - -
Mibi06g2882 1466 SMART iq_5 830 852 IPR000048 GO:0005515
Mibi06g2882 1466 SMART iq_5 878 900 IPR000048 GO:0005515
Mibi06g2882 1466 SMART iq_5 807 829 IPR000048 GO:0005515
Mibi06g2882 1466 SMART iq_5 855 877 IPR000048 GO:0005515
Mibi06g2882 1466 SMART iq_5 782 804 IPR000048 GO:0005515
Mibi06g2882 1466 SMART iq_5 759 781 IPR000048 GO:0005515
Mibi06g2882 1466 FunFam Myosin 2 337 449 - -
Mibi06g2882 1466 Pfam IQ calmodulin-binding motif 881 900 IPR000048 GO:0005515
Mibi06g2882 1466 Pfam IQ calmodulin-binding motif 810 829 IPR000048 GO:0005515
Mibi06g2882 1466 Pfam IQ calmodulin-binding motif 762 780 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2882 Mibi-ChrMibi06 48348195 48359156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2882 26 1466 Myosins gene family AT1G54560 72.632 0.0 2234
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2882 06 48348195 48359156 Mibi06g2345 06 43711165 43726446 CCT
Mibi06g2882 06 48348195 48359156 Mibi06g2882 06 48348195 48359156 ECH