Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2876 ATGACCCACCACTTACATCTCCATATCTTGCTCTGTGTCCTCTATTATCTCTCTCCTGCCTTCCATGCCATCCTTGTAAGGAGCGAAAGGCCGTCGTCGTTGATGCTGGGATGTGGGTTGGGAGGCAAAGACTCAGACGGAAGGCAATGGAGCCCCGATAACAAGTACCTATCAGGGGGTGATTCCACCACTTTCACAGCCTCGTACCAGGATCCTTCGCTTTCTTCCGAGGTTCCATACATGACAGCTCGGGTTTTCACTTCGGAGGCCTCCTACAAATTTCCCGTTGCTCCCGACAAACGTTATTGGCTGAGGCTCCACTTTTATCCCTCCCTCTATTCTAATTTCGATCCTTCCGATTCATATTTCTCCGTCACCGCAAATGGGCTCACCCTCCTCACCAATTTCAGCGCCTCCATTACCTGTGAAGCCCTCTCCCAGGCTTACATCGACAGAGAGTATTCCCTCGCCCCGCTCAGCTCAGATTCCCTCACCCTCACCTTCAAGCCTTCTGACAATCACAAAGTCTCTTTCGCTTTTGTCAATGGCATTCAACTCATGCAAATGCCAGACCTCCTTTTTCATTCTTCCGCCACCTTGGTGGGTTCCAACCAACTCATTGATGCCACAAGCTTGCATTCTCAGACCATGATCAGGCTGAATGTGGGAGGACAATACATATCGCCACCCCAAGACTCTAATATGGGCAGATGGTGGTACGACGACACGCCTTATCTGTACGGCGCATCCGCGGGCGTCACAACCCAAGCAAACGACACCGTCCCAATCAAATACCAAACCATGCCTCAGTACATCGCCCCTCCTACTGTCTACTCCACATCCAGGTCCATGGGAAGCGACAAGGATGCTAACTTGGGGTATAACCTTACCTGGATCTTCCAAGTGGATCCTAATTCCATGTATCTCGCAAGGCTACACTTCTGCGATTACACATTCGACAAAATCAACGAGATAGCCTTCAATATATACTTGAATAACCAGACGGCGCAGGTCGGGGCGGATGTGATCGCATGGACGAGTGGGAGAGGTGTGCCCACTTACAAGGACTACATAGTCTATTGCGCCGACCAACTCTGGCTCGCGCTCCACCCTGCCACCCACTTGAAGCCTGAATACTATGATGCCATTCTCAACGGCATCGAGATATTCAAGCTCAATGATACATCTTTAGCGGGACCCAATCCTCAGCGGGAGGAGCAGCATAATACTTTCCAGGCCAAAGATCAACAGAGCGCTCCTCCTCGTCCTGCTATTATTGGTGGGGCTGCTTTACTGGCAGTACTATGCATGGCGGCTTACCAGAGGCAGAAGGGAGCCCAAGGATCATATTCACACACTTCAAGCTGGCTTCCACTCTATGGGAATACCCAGAGTTCTAGTAAATCCACCATGTCTGGGAAGAGCACTGGTGGCGTTACCTTGGCGGCCACGGCTCAGGGTCTTTGCAGGCATTTCTCCTTGTCAGAGATGAAGCATGCGACCAAGAATTTCGATGAGTCCAATGTTATTGGGGTTGGAGGATTTGGTAAGGTGTACAGAGGTGTGGTTGATGATGGGATTCAAGTGGCAATCAAGAGGTCCAATCCTCAATCGGAACAGGGGGTGAATGAATTCCAGACTGAGATTGAGATGCTTTCCAAGCTGAGGCACAAGCATTTGGTGCTCTGTGCGAGGCCTGCCTTGAATCCTACCCTTCCCAAGGAACAGGTGAGTCTGGCGGATTGGGCTCTACTCAACAAAAGAAAAGGGACTTTAGAGGATATAGTGGACCCCAATCTCAAAGGAAAGATCCGTCCAGAGAGCTTAAGAAATTTTGCAGATACTGCAGAAAAGTGCTTGTCAGATCATGGAGTGCATCGTCCCACGATGAATGATCTGTTATGGAATCTTGAACTTGCCCTGCAGCTGCAGGAAAACCCCGAGGGATCAATTCTGTCATCTGCTGGTGAGTTCGAAGAGCTTAGCTTGAAAGGCAATGATGTGGCGACACATTATAAGAATGTAAGCCTTGGGGGTGAGCAAGAGACTAGCAAGGAGTCGGGTGAGGATTATAATACCATCTTCTCACTAATGGTCAATCCCAAGAGACGATGA 2115 0.4988 MTHHLHLHILLCVLYYLSPAFHAILVRSERPSSLMLGCGLGGKDSDGRQWSPDNKYLSGGDSTTFTASYQDPSLSSEVPYMTARVFTSEASYKFPVAPDKRYWLRLHFYPSLYSNFDPSDSYFSVTANGLTLLTNFSASITCEALSQAYIDREYSLAPLSSDSLTLTFKPSDNHKVSFAFVNGIQLMQMPDLLFHSSATLVGSNQLIDATSLHSQTMIRLNVGGQYISPPQDSNMGRWWYDDTPYLYGASAGVTTQANDTVPIKYQTMPQYIAPPTVYSTSRSMGSDKDANLGYNLTWIFQVDPNSMYLARLHFCDYTFDKINEIAFNIYLNNQTAQVGADVIAWTSGRGVPTYKDYIVYCADQLWLALHPATHLKPEYYDAILNGIEIFKLNDTSLAGPNPQREEQHNTFQAKDQQSAPPRPAIIGGAALLAVLCMAAYQRQKGAQGSYSHTSSWLPLYGNTQSSSKSTMSGKSTGGVTLAATAQGLCRHFSLSEMKHATKNFDESNVIGVGGFGKVYRGVVDDGIQVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVLCARPALNPTLPKEQVSLADWALLNKRKGTLEDIVDPNLKGKIRPESLRNFADTAEKCLSDHGVHRPTMNDLLWNLELALQLQENPEGSILSSAGEFEELSLKGNDVATHYKNVSLGGEQETSKESGEDYNTIFSLMVNPKRR 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2876 704 FunFam receptor-like protein kinase FERONIA 465 564 - -
Mibi06g2876 704 Pfam Protein tyrosine and serine/threonine kinase 508 563 IPR001245 GO:0004672|GO:0006468
Mibi06g2876 704 Gene3D - 212 393 - -
Mibi06g2876 704 Gene3D - 35 190 - -
Mibi06g2876 704 PANTHER OS03G0124300 PROTEIN-RELATED 9 444 - -
Mibi06g2876 704 SUPERFAMILY Protein kinase-like (PK-like) 484 561 IPR011009 -
Mibi06g2876 704 MobiDBLite consensus disorder prediction 398 417 - -
Mibi06g2876 704 FunFam FERONIA receptor-like kinase 212 393 - -
Mibi06g2876 704 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Mibi06g2876 704 ProSiteProfiles Protein kinase domain profile. 504 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2876 704 Gene3D Phosphorylase Kinase; domain 1 480 561 - -
Mibi06g2876 704 FunFam FERONIA receptor-like kinase 33 190 - -
Mibi06g2876 704 SMART tyrkin_6 504 637 IPR020635 GO:0004713|GO:0006468
Mibi06g2876 704 Pfam Malectin-like domain 38 391 IPR024788 -
Mibi06g2876 704 Gene3D Transferase(Phosphotransferase) domain 1 562 644 - -
Mibi06g2876 704 MobiDBLite consensus disorder prediction 398 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2876 Mibi-ChrMibi06 48291268 48293799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2876 562 704 Receptor kinase-like Gene Family AT3G51550 45.732 1.14e-33 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mibi06g2876 Malectin_like 5.3e-39 CL0202