Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2871 ATGGATAGGGTGTTCTCAGTGGATGAAATGGCCGAGCAGTTCTGGTCATCGCCGGTGTCCTCCGGAACCCTAGAAGTTGAGCCTGGGCCCTCCAAATCCAATATGAACCGTAGCGCCTCCGAGTGGGCCTTCCAGCGCTTCCTTCAAGAAGCTTCTGTCTCCTCCCCGACCTCTCCTTCTCCTTCTTCCTCCTTCCCTCCTCACCCCAACGATCCCAAACACGATTCCACTCTCAATACGCTTCATGCCAATGTGCCTTCTATTCCTACCATTCCCCTTAATCCCGATGACTACCAGGCCTACCTCAAGAACAAACTCAATCTCGCCTGTGCTGCCGTCGCATTGTCTCGGGGATCTTTAATCAAAGCTCAAGAGTCAGCTACTTTTGTTGATAGTGGATCACAGGCCTCTAATTCTTCCCAAGTTGGAGCTCAGGCTACTCTTAAAGGATCTGGCATATCTGGTCTGTCTGGAAGTGATCCATCTAAATTACTGGACAAAGATACCAAAGCACCAGTTGGAATCCCTTCTTTACCTGCGATTCAAAAGAAGCCTGCTGTTGCAAGCAAGCCAACAACAAGTGGATCATCAAGGGACCTGTCAGATGATGATGACATTGAGGGAGAAACTGAGATGACTGATAATATGGACCCTGCTGATGCCAAACGAGTAAGGAGGATGCTTTCCAATAGGGAATCTGCTAGACGTTCAAGAAGGAGAAAGCAAGCTCATTTAACCGACCTTGAGACACAGGTTTCTCAATTAAGAGTTGAAAATTCATCCTTGTTAAAGCGTCTTACTGATGTAAGCCATAAGTACAACGAATCTGGTGTTGACAACAGAGTGCTAAAAGCTGACATTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACTGTCAAAAGAATTACTGGATTGAACCCAATGTTACATGCCATGTCAGAGTTATCATCAATGGGAATCTCTTCATTCGATGGAAGCCCTCCAGACACATCGGCGGATGCAGCTGTTCCCATACAAGATGATCCAATCCATCACTTTTATCAACCTACAAATACTCCTTTGTCCAGTCATGATTTGAGAGTGAACAATGGATTGGGAGATGTTGGTTCAAATGAAAACGTTCAACAGAGCAGGGCAGCTGTGGTAGCTGGGAACAAGATGGGACAGTCAGTTTCCCTTCAGAGGGTGGCTAGCTTGGAACATCTGCAGAAAAGAATTTGTGGTGGTGCAGATTCCTCTGGACCTTCTTCCAGCGGGGATCATTAG 1272 0.4662 MDRVFSVDEMAEQFWSSPVSSGTLEVEPGPSKSNMNRSASEWAFQRFLQEASVSSPTSPSPSSSFPPHPNDPKHDSTLNTLHANVPSIPTIPLNPDDYQAYLKNKLNLACAAVALSRGSLIKAQESATFVDSGSQASNSSQVGAQATLKGSGISGLSGSDPSKLLDKDTKAPVGIPSLPAIQKKPAVASKPTTSGSSRDLSDDDDIEGETEMTDNMDPADAKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRVENSSLLKRLTDVSHKYNESGVDNRVLKADIETLRAKVKMAEETVKRITGLNPMLHAMSELSSMGISSFDGSPPDTSADAAVPIQDDPIHHFYQPTNTPLSSHDLRVNNGLGDVGSNENVQQSRAAVVAGNKMGQSVSLQRVASLEHLQKRICGGADSSGPSSSGDH 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2871 423 MobiDBLite consensus disorder prediction 152 222 - -
Mibi06g2871 423 SUPERFAMILY Leucine zipper domain 222 272 IPR046347 GO:0003700|GO:0006355
Mibi06g2871 423 SMART brlzneu 218 282 IPR004827 GO:0003700|GO:0006355
Mibi06g2871 423 Coils Coil 238 265 - -
Mibi06g2871 423 Pfam Basic leucine-zipper C terminal 289 412 IPR020983 -
Mibi06g2871 423 MobiDBLite consensus disorder prediction 17 38 - -
Mibi06g2871 423 MobiDBLite consensus disorder prediction 69 83 - -
Mibi06g2871 423 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 225 240 IPR004827 GO:0003700|GO:0006355
Mibi06g2871 423 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 220 275 IPR004827 GO:0003700|GO:0006355
Mibi06g2871 423 MobiDBLite consensus disorder prediction 228 247 - -
Mibi06g2871 423 FunFam BZIP transcription factor 220 271 - -
Mibi06g2871 423 Pfam bZIP transcription factor 221 272 IPR004827 GO:0003700|GO:0006355
Mibi06g2871 423 Coils Coil 280 307 - -
Mibi06g2871 423 PANTHER BASIC LEUCINE ZIPPER 63 1 412 - -
Mibi06g2871 423 Gene3D - 221 275 - -
Mibi06g2871 423 MobiDBLite consensus disorder prediction 50 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2871 Mibi-ChrMibi06 48259943 48263184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2871 1 311 bZIP Transcription Factor Family AT4G02640 41.369 6.72e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi06g2871 bZIP_C 4.2e-44 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2871 06 48259943 48263184 Mibi06g2871 06 48259943 48263184 CCT
Mibi06g2871 06 48259943 48263184 Mibi06g2871 06 48259943 48263184 ECH