Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2835 ATGGGGTGCATGATTAGTCGAGAAGTGTCATCTGAAATAACCTCAGAGGTGAAGGAGCAGAGGAATTTGAGTGCTGAGTCGAACGGGAACATAGATGAAAGCTCCACGGGTAGAGCTGAGGGGAAAGTGGTTGAGGTTCAGCACACTGACAACCAAAAGGAAGAGCAAGATGGTGATGATGGGGCCCAGGTTCAGCAGTCCCGGAGCAGGAGGAGAAGGTCAAAGCCAAACCCAAGGCTAAGTAACCCTCCAAAGCATTTGCAGGGGGAGCAAGTAGCAGCTGGGTGGCCCCCCTGGCTTACGGCAGTGTGTGGAGAAGCACTTAGTGGGTGGACTCCTCGGAAGGCCGACTCATTTGAGAAAATTGATAAGATTGGGCAAGGAACGTATAGCAATGTGTATAAAGCTAAAGACATGTCGACTGGTAAAATTGTTGCATTAAAGAAGGTTCGATTTGACAATTTGGAGCCTGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTTATTTTGCGAAGATTGGATCATACCAATGTTGTAAAGTTGGAAGGTTTAGTTACATCAAGAATGTCCTGTAGTTTGTATTTGGTGTTTAATTACATGGAACATGATCTGGCTGGACTTGCTGCGAGCCCAGAAATCAAGTTCACCGAGCCTCAGGTCAAATGTTACATGCACCAACTATTATCAGGACTTGAGCACTGTCATAACCTTCGCGTACTTCACCGTGATATTAAAGGATCAAATCTTCTCATTGACAATGAAGGAATATTAAAGATAGCTGACTTTGGGTTGGCATCTTTCTTTGACCCTAACCGGAAGCTGCCAATGACTAATCGTGTAGTTACACTTTGGTATCGACCTCCTGAGTTGCTTCTTGGTGCCACAGAATATGGTGTGGGAGTGGATCTTTGGAGCGCAGGTTGCATTTTGGGAGAGTTATTGGCAGGAAAGCCAATTATGCCTGGTCGCACAGAGGTGGAGCAACTGCATAAGATATACAAACTATGTGGTTCACCCTCAGATGAGTACTGGAAGAAGTCAAAGTTGCCGAATGCTACCTTGTTTAAACCTCGAGAGCCTTACAAGAGATGCATACGAGAGACGTTTAAAGATTTTCCACCTTCTGCACTTACACTCATGGATACTCTTCTCGCACTTGATCCAGCAGAACGGAAGACGGCATCAGATGCCCTACAAAGTGAGTTCTTCACCACAGAACCTTATGCCTGTGATCCTTCTAGTCTTCCCAAATATCCACCAAGCAAGGAAATGGATGCTAAACGCAGAGATGATGAAGCGAGGAGACAACGAGCTGCAGGCAAAGCTCAGGTTGATGGTGCAAAAAAACACCGAACACGTCATCGAGCTAAACCTAATCCTGCTCCTGAAGCCAACGCTGAGCTTCAATCCAATATTGATAGAAGGCGTTTAATAACTCGTGCAAATGCGAAGAGCAAGAGTGAGAAGTTCCCGCCACCACATCAAGATGGACAACTTGGCTTTCCGTTGGGATCGTCACATCATATTGATCCAGATGTTGTTCCTCCTGATGTCTCTTTTAATTCAACCTCATTTACCTATTCAAAAGAGCCATTCCAAGCTTGGTCAGGTCCCATTGCCGCGCCCAAGCAGAAGAAACATGGTCCTGGTGATGCAGTGGATTTATCCAAACAACGTACAAGTGCCCTCAGGGATAAACGTTAA 1704 0.4583 MGCMISREVSSEITSEVKEQRNLSAESNGNIDESSTGRAEGKVVEVQHTDNQKEEQDGDDGAQVQQSRSRRRRSKPNPRLSNPPKHLQGEQVAAGWPPWLTAVCGEALSGWTPRKADSFEKIDKIGQGTYSNVYKAKDMSTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHTNVVKLEGLVTSRMSCSLYLVFNYMEHDLAGLAASPEIKFTEPQVKCYMHQLLSGLEHCHNLRVLHRDIKGSNLLIDNEGILKIADFGLASFFDPNRKLPMTNRVVTLWYRPPELLLGATEYGVGVDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCIRETFKDFPPSALTLMDTLLALDPAERKTASDALQSEFFTTEPYACDPSSLPKYPPSKEMDAKRRDDEARRQRAAGKAQVDGAKKHRTRHRAKPNPAPEANAELQSNIDRRRLITRANAKSKSEKFPPPHQDGQLGFPLGSSHHIDPDVVPPDVSFNSTSFTYSKEPFQAWSGPIAAPKQKKHGPGDAVDLSKQRTSALRDKR 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2835 567 Gene3D Phosphorylase Kinase; domain 1 106 201 - -
Mibi06g2835 567 ProSiteProfiles Protein kinase domain profile. 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2835 567 SUPERFAMILY Protein kinase-like (PK-like) 113 410 IPR011009 -
Mibi06g2835 567 MobiDBLite consensus disorder prediction 547 567 - -
Mibi06g2835 567 FunFam probable serine/threonine-protein kinase At1g54610 106 201 - -
Mibi06g2835 567 MobiDBLite consensus disorder prediction 43 67 - -
Mibi06g2835 567 MobiDBLite consensus disorder prediction 536 567 - -
Mibi06g2835 567 MobiDBLite consensus disorder prediction 1 91 - -
Mibi06g2835 567 MobiDBLite consensus disorder prediction 408 515 - -
Mibi06g2835 567 MobiDBLite consensus disorder prediction 8 35 - -
Mibi06g2835 567 PANTHER CELL DIVISION PROTEIN KINASE 117 407 - -
Mibi06g2835 567 MobiDBLite consensus disorder prediction 421 446 - -
Mibi06g2835 567 SMART serkin_6 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2835 567 FunFam probable serine/threonine-protein kinase At1g54610 202 443 - -
Mibi06g2835 567 MobiDBLite consensus disorder prediction 469 491 - -
Mibi06g2835 567 Pfam Protein kinase domain 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2835 567 CDD STKc_CDK9_like 119 403 - -
Mibi06g2835 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Mibi06g2835 567 Gene3D Transferase(Phosphotransferase) domain 1 202 443 - -
Mibi06g2835 567 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2835 Mibi-ChrMibi06 47949242 47953590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2835 111 443 Core Cell Cycle Gene Families AT5G10270 52.722 2.18e-123 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi06g2835 Pkinase 5.1e-67 CL0016