LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi06g2810	ATGGCTTCCCTTCCACTCCCACTCTCTACGTCATATCTGGACACCACCACCGTTATCGCTCTCTCTATCTTCTTCGCCCTTCTCTGCGCTTGCATCGTTGTCGGTCACCTTCTCGAAGAGAACCGTTGGGCCAATGAATCCATCACTGCCCTCTTTCTGGGCCTGTGTTCCGGAGTGGTGGTCTTGCTGGTGACCAATTTCAGGAATACCCAATTATTGCAATTCAGCGAAAACTTGTTTTTCCTTTACTTGCTCCCTCCTATCATTTTTAATGCCGGTTTCCAAGTGAAGAAGAAGCAGTTCTTCAAGAATTTTTCAACTATTCTGCTGCTTGGGGTCATTGGAACTGTTGTTTCATTCTGCTTCATTTCATTTGGTGCCTTTTTTCTACTAAGTAAGATAGGTCTGAGCTTGAAGATGCAAGATTACCTTGCCATTGGTGCCATATTATCAGCAACTGATTCAGTTTGTACATTGCAGGTTCTCAGTCAAGATGAAACACCCTTCCTATACAGCATTGTATTTGGGGAGGGAGTTGTTAATGATGCAACCTCTATTGTACTTTATAATTCAGTCCAGTCCCTTGACTTCAGCAGCATCAGTGCTACTACAGCCCTGACATTGTTGGGGACATTCCTTTACCTATTCATCACTAGCACTGTCCTTGGTATATCAGTTGGCCTTTTGAGTGCTTTTACTATTAAAACGCTTTATTTTGGAAGGCATTCTACAGATCGTGAAGTTGCACTCATGATGCTTATGGCTTATTTATCATACATGATTGCTGAGCTTTTGAGTCTCAGTGGAATTTTGACAATTTTCTTTTGCGGCATTGTCATGTCACATTACACGTGGCACAATGTCACAGAAAGCTCAAGGATAACTACCAAGCATGCCTTTGCAACTATCTCATTCATCGCAGAAACTTTTATATTTATATACGTTGGCATGGATGCTTTGGATATTGAAAAATGGAAAACCAGCAACGCAAGCGTAGGGACTTCAATTGCTGTCAGTTCAACTTTCTTGGCGTTAGTGTTGATGGGTAGGGCAGCTTTTGTGTTTCCTATTTCAAACATTAAAAACTGCATCAAGACACAAGAGAGTTCCAAAATTCATTTCCGATCACAGTTTATAATATGGTGGGCAGGCCTATTGAGAGGTGCAGTGACTATTGCCTTGTGTTATTACCAGTTTGAAAAGGAGAAAGAGTCAGCTCAAGACTGTGCAGTGGTGATCACCTCCACCGTAATTGTCGTATTATTCAGTACTGTGGTGTTTGGTTCCATAACAAAGCCCCTGATCCAGGCGGTGCAGCTGAGGCATTCAAAACCACCGATTTCTGAAACCACTGAAACTGCGGAGGATTTTAGATTCTTACTCCTTGAAAGTGCCGGTCCCAGTGACCATGGCAACAATCAACCAGTCCGGAGGAGAAGCAGCCTAAGTTTACTCATAAGTTATCCGACTAGAACGGTTCACTACTTTTGGAGGCAATTTGACGACAGATATATGAGACCATTATTTGGTGGGAGGGGTTTTGTTCCAATTATTCCTGTTTCACCTTCTGGCTCTGATGGAGCGCCGGACTCTCCTCCTGCCCCAAACAACTGA	1614	0.4318	MASLPLPLSTSYLDTTTVIALSIFFALLCACIVVGHLLEENRWANESITALFLGLCSGVVVLLVTNFRNTQLLQFSENLFFLYLLPPIIFNAGFQVKKKQFFKNFSTILLLGVIGTVVSFCFISFGAFFLLSKIGLSLKMQDYLAIGAILSATDSVCTLQVLSQDETPFLYSIVFGEGVVNDATSIVLYNSVQSLDFSSISATTALTLLGTFLYLFITSTVLGISVGLLSAFTIKTLYFGRHSTDREVALMMLMAYLSYMIAELLSLSGILTIFFCGIVMSHYTWHNVTESSRITTKHAFATISFIAETFIFIYVGMDALDIEKWKTSNASVGTSIAVSSTFLALVLMGRAAFVFPISNIKNCIKTQESSKIHFRSQFIIWWAGLLRGAVTIALCYYQFEKEKESAQDCAVVITSTVIVVLFSTVVFGSITKPLIQAVQLRHSKPPISETTETAEDFRFLLLESAGPSDHGNNQPVRRRSSLSLLISYPTRTVHYFWRQFDDRYMRPLFGGRGFVPIIPVSPSGSDGAPDSPPAPNN	537

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi06g2810	537	PRINTS	Na+/H+ exchanger signature	147	157	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085
	Mibi06g2810	537	PRINTS	Na+/H+ exchanger signature	79	90	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085
	Mibi06g2810	537	PRINTS	Na+/H+ exchanger signature	93	107	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085
	Mibi06g2810	537	PRINTS	Na+/H+ exchanger signature	108	116	IPR004709	GO:0006814\|GO:0006885\|GO:0015385\|GO:0016020\|GO:0055085
	Mibi06g2810	537	Pfam	Sodium/hydrogen exchanger family	21	435	IPR006153	GO:0006812\|GO:0015299\|GO:0016020\|GO:0055085
	Mibi06g2810	537	Gene3D	-	138	191	-	-
	Mibi06g2810	537	PANTHER	SODIUM/HYDROGEN EXCHANGER	14	509	IPR018422	GO:0006812\|GO:0015299\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi06g2810	Mibi-ChrMibi06	47723424	47729159	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi06g2810	8	533	Antiporters	AT3G05030	60.634	0.0	654