Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2806 ATGTGTCTCCCAGAGGGAGAGAGAGACAGCCAGACGACTTCCATGGCTCTCGAAGCAGTTGTTTTCCCTCAAGACTATCCTTTTGGTTCTCTGTGGCCCTTTCATCACGACGACTTCAACCAACAACAAGGCTTCCTCAATTTCCTCCACACCCAATCAGAAACCACTAATCATGCCTTGGGAGATTGGCAGACCCATATTTGCTCCTCTTCGTCTGCGCCGTCCTCTGTGTTACCGCATCCGGGAGAACCATATCTCCCAATTAATCACTCCAACTCGAACAACTCTGATACCATCCCAACGCCATCACATGAGGCCGTCATGGCGGATTCCTCGAACTCTCGTCCCAAGAGAAGGAGGGCCAGGACGAGAAAGAACCAGGAGGAGATAGAGAACCAGAGAATGACACACATTGCGGTGGAGCGCAATAGGAGGAAACAGATGAACGAGTATCTCTCTGTTCTTCGCTCTCTCATGCCCGACTCCTACGTCCAAAGGGGGGATCAAGCATCCATAATAGGAGGGGCAATTAACTTTGTGAAGGAGCTGGAGCAGAGGCTGCAGTCTATGCGGGGTAAGGAAAAAACAGAGTCTAAATCTGAGAGCACGCCCTTCTCCGAGTTCTTCACGTTTCCTCAGTATTCGACTACGGGCGAGGTGACGTCATCATCGGAGGGTTGCGTAGCAGACATAGAAGTGACGATGGTGGAGAGCCATGCCAATCTGAAGATAAGGTCAAAGAAGAGGCCCAAGCAGCTCTTAAAGATAGTCTCTGCCCTGTACACCATGCGCCTCACCATCTTGCATCTCAACGTCACCACCACCGCAGATATTGTGCTCTACTGCATCAGCGTCAAGCAGATGGAAGAAGAGTGCAAGCTGGGATCGGTGGAGGAGATAGCAGGGGCACTGCACAAAACATTAGAGAGCATCGAACAAGAGTGTGCGCAAAATCAACATCCCAACACCAGCTAG 975 0.5097 MCLPEGERDSQTTSMALEAVVFPQDYPFGSLWPFHHDDFNQQQGFLNFLHTQSETTNHALGDWQTHICSSSSAPSSVLPHPGEPYLPINHSNSNNSDTIPTPSHEAVMADSSNSRPKRRRARTRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSMRGKEKTESKSESTPFSEFFTFPQYSTTGEVTSSSEGCVADIEVTMVESHANLKIRSKKRPKQLLKIVSALYTMRLTILHLNVTTTADIVLYCISVKQMEEECKLGSVEEIAGALHKTLESIEQECAQNQHPNTS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2806 324 CDD bHLH_AtFAMA_like 135 202 - -
Mibi06g2806 324 PANTHER MAX DIMERIZATION, MAD 66 315 - -
Mibi06g2806 324 SMART finulus 138 189 IPR011598 GO:0046983
Mibi06g2806 324 Pfam Helix-loop-helix DNA-binding domain 133 184 IPR011598 GO:0046983
Mibi06g2806 324 MobiDBLite consensus disorder prediction 89 110 - -
Mibi06g2806 324 MobiDBLite consensus disorder prediction 89 126 - -
Mibi06g2806 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 132 183 IPR011598 GO:0046983
Mibi06g2806 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 132 194 IPR036638 GO:0046983
Mibi06g2806 324 Gene3D - 120 199 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2806 Mibi-ChrMibi06 47692749 47693894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2806 15 286 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 48.845 2.10e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi06g2806 HLH 4.4e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2806 06 47692749 47693894 Mibi06g2806 06 47692749 47693894 CCT
Mibi06g2806 06 47692749 47693894 Mibi06g2806 06 47692749 47693894 ECH