Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2805 ATGCCTCCCCTCCTCCTCCTCCTCCTCCCCGTGGCCTCCGCGCAGGGGGGGAACACGGGCCCAACAGGCCCATACTACAACAACGCCTACAGCCCCTCCTTCGCCATCATCATCGCCATCCTTGTCGCCGCCCTCTTCCTCACCGGTGTCTTCTCCATCTACCTACGCCACTGCGGCAGTTCTTCCACCGCCTCCGCCGCCCTCCCCAGCCTCTCCACACGCCGCGGCGGCGGAGGCCTAGACGCCGCCATCATGCAATCATTCCCCACGCTTGAGTACTCGGCGGTGAGGATCCACAAGATAGGAAAGGGAGCCCTGGAGTGCGCAATCTGCCTGAACGAGTTCGACGACTCCCAAAGACTACGTGTCATCCCCAGATGCGACCACGTCTTCCACCCAGACTGCATCCAACAGTGGCTCTCCTCCCACACCACCTGCCCCGTCTGCCGAGCCGACCTCACCGCCCCCCCTCCCCCTGCCCCTGCCCCCGTGCAGATGGACGGCCACCCCACCACGGCGCCGCCGCCTGTGTGGGTGTGGTGGGCGAGGTCTCATTCCACGGGGCACTCCCTCACACAGCCTGACAGGGACAGGTACACTTTGAGGCTGCCCCCCGACGTTAGGAACCGGCTGCTCAATCAGAGGTTTCACCGGGCCACCAGCTTGGTGGTGTTGCCCAGGGAGAGTGCTTCCAGCCGGGGGTTTAGATCCGACCGCTGGGTTTTCACCATGGCCCCGCCTTTCTTGGTCAGGGCCTCCTCCCTCAGCTCTCCCAAGGTGCCCACTACCAGCTCCGACCCCATCATGCCTCAATCGGCCCTCCCCTCCTCCCGCCCTCCTCTTTAA 846 0.6489 MPPLLLLLLPVASAQGGNTGPTGPYYNNAYSPSFAIIIAILVAALFLTGVFSIYLRHCGSSSTASAALPSLSTRRGGGGLDAAIMQSFPTLEYSAVRIHKIGKGALECAICLNEFDDSQRLRVIPRCDHVFHPDCIQQWLSSHTTCPVCRADLTAPPPPAPAPVQMDGHPTTAPPPVWVWWARSHSTGHSLTQPDRDRYTLRLPPDVRNRLLNQRFHRATSLVVLPRESASSRGFRSDRWVFTMAPPFLVRASSLSSPKVPTTSSDPIMPQSALPSSRPPL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2805 281 SMART FANCL_C_2 104 158 - -
Mibi06g2805 281 FunFam E3 ubiquitin-protein ligase ATL6 70 156 - -
Mibi06g2805 281 SUPERFAMILY RING/U-box 102 162 - -
Mibi06g2805 281 CDD RING-H2_PA-TM-RING 107 150 - -
Mibi06g2805 281 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Mibi06g2805 281 Pfam Ring finger domain 107 150 IPR001841 -
Mibi06g2805 281 MobiDBLite consensus disorder prediction 254 281 - -
Mibi06g2805 281 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 156 IPR013083 -
Mibi06g2805 281 PANTHER RING FINGER DOMAIN-CONTAINING 26 157 - -
Mibi06g2805 281 MobiDBLite consensus disorder prediction 255 272 - -
Mibi06g2805 281 SMART ring_2 108 149 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2805 Mibi-ChrMibi06 47676338 47677183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2805 1 277 Rapid Response to Elicitors AT3G05200 40.122 1.33e-69 219