Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2800 ATGAGTGTCCTCGATACTGCAGAGCAGAGCATCACCTGTTTAAGAAGTTGGAACAGGATGGATCATCAAGGGCATAACCAGAATCCATCCATGGATCATCATCAACTGCCTTACGCTTCGAACCCGTACCAGGCGACCCAAATAACTGCAACACCGGGATCTGCGGTGACATCAGTTGGGAACATTCAGTACAGTGGTCAGCCTGCCGGAGCCCAACTTGGACAACACCAACTTGCTTATCAGCACATTCACCAGCAACAGCAGCAGCAACTTCAGCAACAACTCCAAACCTTTTGGTCTAATCAGTACCAAGAAATCGAGAAGGTTACTGATTTCAAGAATCACAGTCTTCCCTTGGCGAGGATCAAGAAGATTATGAAAGCTGATGAGGATGTTCGAATGATATCAGCCGAGGCACCAGTCATATTTGCAAGGGCCTGTGAGATGTTTATACTAGAGCTAACTCTGCGTTCCTGGAATCACACTGAAGAGAACAAAAGGAGAACGCTTCAGAAGAACGATATTGCAGCAGCAATCACAAGGACTGATATATTTGATTTCTTGGTTGATATTGTGCCGCGTGAGGATTTGAAAGATGAAGTGCTTGCATCAATCCCAAGAGGGACAATGCCTGTGGCAGGGCCTGCTGATGCACTTCCTTATTGCTACATGCCACCTCAGCATTCGCCGCAAGTAGGCACTTCTGGTGTCATAATGGGTAAACCTGTGATGGACCCGACCATGTATGCCCAACAGTCTCATCCCTACATGCAGCAGCAGATGTGGCCACAGCCTCCAGATCAGCAACGTCAATCAACTCCTGATCGTTAG 831 0.4765 MSVLDTAEQSITCLRSWNRMDHQGHNQNPSMDHHQLPYASNPYQATQITATPGSAVTSVGNIQYSGQPAGAQLGQHQLAYQHIHQQQQQQLQQQLQTFWSNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALPYCYMPPQHSPQVGTSGVIMGKPVMDPTMYAQQSHPYMQQQMWPQPPDQQRQSTPDR 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2800 276 FunFam Nuclear transcription factor Y subunit gamma 81 194 - -
Mibi06g2800 276 Gene3D Histone, subunit A 78 194 IPR009072 GO:0046982
Mibi06g2800 276 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 76 245 - -
Mibi06g2800 276 MobiDBLite consensus disorder prediction 257 276 - -
Mibi06g2800 276 Pfam Core histone H2A/H2B/H3/H4 77 179 IPR007125 GO:0003677
Mibi06g2800 276 SUPERFAMILY Histone-fold 85 188 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2800 Mibi-ChrMibi06 47635785 47638646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2800 20 262 CCAAT-HAP5 Transcription Factor Family AT1G08970 61.475 3.03e-89 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mibi06g2800 CBFD_NFYB_HMF 6.4e-18 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2800 06 47635785 47638646 Mibi06g2800 06 47635785 47638646 CCT
Mibi06g2800 06 47635785 47638646 Mibi06g2800 06 47635785 47638646 ECH