Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2790 ATGAGTGTTGATCTGGAATCGTTGGCGGAGGCCACGTCTGGTGCCATTGGATCACTCTTGAGCACCACCATCTTGTACCCTCTTGACACCTGTAAGACCAAGTACCAAGCCGAGGCTCGCACTCATGGCCTCCCAAAATACAGGAACCTCTCTGATGTGTTATGGGAAGCAATATCTTCCGGTCGGGTGCTTTCCCTTTATCAGGGTCTTGGAACAAAAAACCTTCAATCCTTCATTTCACAGTTTGTCTACTTCTATGGCTACAGCTACTTTAAAAGAATGTATCTGCGGAAGAGCGGTTCTAAACGTATTGGAACCAAAGCAAACTTGGTCATTGCTGCTGCTGCTGGGGCCTGCACTGCCATTGTGACTCAGCCTCTGGATACAGCCTCTTCAAGGATGCAGACGAGTGATTTTGGAAAATCTAAAGGTCTTCTGAAGACCCTTACAGAAGGCACTTGGAGTGATGCATTTGATGGTCTCAGCATTTCCTTACTGCTGACCTCAAACCCAGCAATTCAGTATACAGTTTTTGATCAGCTGAAACAACGAGCCCTGAAGAGTAAGCAAAACAGTGTGGACAAAGGATCATCTCCAGCATCCCTCTCTGCATTTATGGCCTTTCTATTGGGAGCTATTTCAAAGAGTGTTGCTACTGTCTTAACATATCCAGCTATCAGGTGCAAGGTTATGATTCAAGCTGCAGACAATGAGGAAAAATCAGCCTCAAAATCACAGAAAAAGTCAGGGAAAACAATTTGTGGAGTTCTTTGTGCTATATGGCAAAGGGAGGGCTTACCGGGTTACTTCAAAGGATTGCATGCCCAAATCTTAAAGACTGTTTTGAGCTCGGCATTGCTTTTGATGATAAAGGAGAAGATCTCTGCCACTACTTGGGTACTTATACTTGCAACTAGAAGGTTACTGTTGCTCCCAAAGGGCAGAGTAAAAAGCATATAA 960 0.4469 MSVDLESLAEATSGAIGSLLSTTILYPLDTCKTKYQAEARTHGLPKYRNLSDVLWEAISSGRVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRMYLRKSGSKRIGTKANLVIAAAAGACTAIVTQPLDTASSRMQTSDFGKSKGLLKTLTEGTWSDAFDGLSISLLLTSNPAIQYTVFDQLKQRALKSKQNSVDKGSSPASLSAFMAFLLGAISKSVATVLTYPAIRCKVMIQAADNEEKSASKSQKKSGKTICGVLCAIWQREGLPGYFKGLHAQILKTVLSSALLLMIKEKISATTWVLILATRRLLLLPKGRVKSI 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2790 319 Gene3D Mitochondrial carrier domain 3 296 IPR023395 -
Mibi06g2790 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 297 IPR018108 -
Mibi06g2790 319 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Mibi06g2790 319 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Mibi06g2790 319 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Mibi06g2790 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Mibi06g2790 319 SUPERFAMILY Mitochondrial carrier 7 293 IPR023395 -
Mibi06g2790 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Mibi06g2790 319 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 318 IPR045900 GO:0005347|GO:0006635|GO:0015217
Mibi06g2790 319 FunFam Peroxisomal adenine nucleotide carrier 1 3 298 - -
Mibi06g2790 319 Pfam Mitochondrial carrier protein 202 295 IPR018108 -
Mibi06g2790 319 Pfam Mitochondrial carrier protein 105 187 IPR018108 -
Mibi06g2790 319 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2790 Mibi-ChrMibi06 47600212 47602578 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2790 23 313 Chloroplast and Mitochondria Gene Families AT1G25380 26.433 1.71e-13 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2790 06 47600212 47602578 Mibi06g2790 06 47600212 47602578 CCT
Mibi06g2790 06 47600212 47602578 Mibi06g2790 06 47600212 47602578 ECH