Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2782 ATGGTTACTCACTACTCTCACTCAAGACAACACACACACACACACACAAGACACAACCCAATGCAAATGCAAGACATTTTCGGATCAGTTCGCCGATCACTGGTGTTTCGTGCTACGCCGGAGAACGAAGAAGCATCACTTGGAGGAACCCTAGTTGATAGGATCAATTCTTGCATCCGCAAGTCCAGAGTCTTCTCTAAAACTTCCCCGTCGTCTCCGCCATTACCGCCCACCACAAAGGAATCTTCACCAATGATCCGATGGCGCAAGGGTGAGTTGATCGGTTGCGGTGCCTTTGGCCGAGTTTACATGGGCATGAATCTTGATTCTGGAGAGCTTCTAGCAGTAAAGCAGGTTCTGATCGCGGCTAGTAGTGCTTCGAAGGAGAAGGCCCAGGCTCACATAAAGGAGCTTGAGGAGGAAGTTAAACTTCTTAAAGATCTTTCTCATCCCAATATTGTTAGATATTTGGGTACAGTCAGGGAGGAGGACACCTTAAATATTCTCCTGGAGTTTGTACCAGGTGGATCCATTTCTTCACTTTTGGGGAAGTTTGGAGCTTTCCCTGAGGCTGTTATTAGAACATTCACGAAGCAGTTACTGCTAGGACTTGAGTACTTGCACAAAAATGGAATCATGCACAGGGACATTAAGGGGGCAAATATCCTTGTTGATAATAAAGGGTGCATAAAACTTGCAGATTTTGGGGCATCCAAACAGGTTGTTGAATTGGCTACCATTTCCGGTGCCAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTCATTCTACAGACGGGGCATAGCTTCTCTGCTGACATATGGAGCGTTGGCTGTACTGTGATTGAAATGGCCACCGGAAAACCTCCCTGGAGCCAGCAGTACCAAGAGGTTGCTGCTCTCTTCCATATAGGGACAACAAAATCTCATCCACCAATTCCGGATCATCTCTCTGTTGGAGCAAAAGATTTTCTATTAAATTGTTTGCAGAAGGAACCATTCTTAAGGCCATCAGCATCAGAACTGCTGCAGCATCCCTTTGTTACTGGTGAAAACACGGGTTCATTTCCTGGGTCATATACAGCAATGGGAAAATTTGAAGCTTCAGCATCGTGCATATCAAATGTCGAAACTCTCTCAACTTTACATCCTGAGGAAGAAAATAAAGAGTATTCAGGAATGGGGAACGATGACGACATGTGTGAGATTGATGATAAAGATGAGTTCTCTGAGGGGGCTGTTAAATTTAGAGCCTCGATGTCAGAAAATATTATGAGTTTCAACCCGATGTCTGATCCCTCCGGTGATTGGAGTTGCAAGTTTGATGTGAGTCCAGAACTGGATCGTAGTGGAGTTAGTACTATCACTGATGAAATGTACAAGCGCTCTGACCACCTGGAGGCTTCCCATGAGGAGCACAAGGATTTTTCCTTTTCAGGTGAACCATCAGTGTTTGAGGAGGATGATGAGCTCACGGAGTCAAAAATACAAGCTTTTTTGGATGAGAAGGCTCTAGGACTGAAAAAACTGCAGACGCCTTTATATGAAGAGTTCTACAACAGTTTAAATACATCTTGTTCTCCCAATGCGGTTGAAAACGCAAATGACGAAAATACTCTGAAGTTCTTGAAATTACCTCCAAAAAGCAGGTCCCCAAATCGGGTACCAATTGGCACCCCATCAAAAGCAGTTGACCATAGTGAAAGTCCCGGAAGTACTGGCAGGTCCTCCCCAAATGTTGAAGGATTGATAGTTGATTCCCAGCAGGAGCCTTCTAGCCCAAGTTTAAGCTTTTCCGAGAGACAGAGGAAGTGGAAAGAAGAACTTGACCAGGAGCTTGAGAGAAAGCGCGAAATGATGCGTCAAGCTGGTATAGGGGGGAAAACATCATCACCAAAGGACCGAGCCTTAAATCGGCAGAGAGAACGATCAAGATTTGCATCACCGGGCACATGA 1962 0.4526 MVTHYSHSRQHTHTHTRHNPMQMQDIFGSVRRSLVFRATPENEEASLGGTLVDRINSCIRKSRVFSKTSPSSPPLPPTTKESSPMIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAASSASKEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTFTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPDHLSVGAKDFLLNCLQKEPFLRPSASELLQHPFVTGENTGSFPGSYTAMGKFEASASCISNVETLSTLHPEEENKEYSGMGNDDDMCEIDDKDEFSEGAVKFRASMSENIMSFNPMSDPSGDWSCKFDVSPELDRSGVSTITDEMYKRSDHLEASHEEHKDFSFSGEPSVFEEDDELTESKIQAFLDEKALGLKKLQTPLYEEFYNSLNTSCSPNAVENANDENTLKFLKLPPKSRSPNRVPIGTPSKAVDHSESPGSTGRSSPNVEGLIVDSQQEPSSPSLSFSERQRKWKEELDQELERKREMMRQAGIGGKTSSPKDRALNRQRERSRFASPGT 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2782 653 Coils Coil 121 148 - -
Mibi06g2782 653 Coils Coil 604 624 - -
Mibi06g2782 653 MobiDBLite consensus disorder prediction 602 624 - -
Mibi06g2782 653 MobiDBLite consensus disorder prediction 468 483 - -
Mibi06g2782 653 ProSitePatterns Protein kinases ATP-binding region signature. 94 117 IPR017441 GO:0005524
Mibi06g2782 653 Pfam Protein kinase domain 89 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2782 653 Gene3D Transferase(Phosphotransferase) domain 1 87 377 - -
Mibi06g2782 653 ProSiteProfiles Protein kinase domain profile. 88 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2782 653 SMART serkin_6 88 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2782 653 MobiDBLite consensus disorder prediction 468 491 - -
Mibi06g2782 653 SUPERFAMILY Protein kinase-like (PK-like) 87 351 IPR011009 -
Mibi06g2782 653 CDD STKc_MAPKKK 87 350 - -
Mibi06g2782 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Mibi06g2782 653 MobiDBLite consensus disorder prediction 545 653 - -
Mibi06g2782 653 MobiDBLite consensus disorder prediction 567 601 - -
Mibi06g2782 653 MobiDBLite consensus disorder prediction 63 83 - -
Mibi06g2782 653 MobiDBLite consensus disorder prediction 1 22 - -
Mibi06g2782 653 FunFam Mitogen-activated protein kinase kinase kinase 2 87 379 - -
Mibi06g2782 653 FunFam Serine/threonine-protein kinase STE11 84 178 - -
Mibi06g2782 653 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 51 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2782 Mibi-ChrMibi06 47541877 47546806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2782 23 652 MAP Kinase Kinase Kinase AT1G54960 58.641 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mibi06g2782 Pkinase 8.7e-71 CL0016