Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2774 ATGACAAAAAAGCCGTACGGACGGGACACAAAGATGGAGGTGGGTGATGGGTGTGCTGTAAAAACTTTGGGAGGGTGGGGGAGTGAAATTGCCGGGAACTTGCAGCACGTGAACAGAAGAATTTTTGTAGCTTCAATGTCAAACATCACGAGCTGTGACAGTGGTGGGAGTTTCTGCACAGAGAATAGCAGAGAAGATGCAGCTATTAAACACCATAATCCTCAACTTCCTGCTGCTCATCATCATCACCAGTTTCACAGTCCAACTTCTCTTACTTCAACCACAACTAACAGTAACGGTTCCAACAACGCCAATTCCCAACTGCCTCCCCCTGTTAAGAAGAAAAGAAGCCTCCCAGGAAACCCAGATCCAAGTGCTGAAGTGATTGCTCTATCACCAAACACTTTGATGGCGAGAAACAGATTCGTATGTGAAATCTGCAGCAAAGGATTCCAAAGGGATCAGAATCTGCAATTGCACCGGCGAGGCCATAACCTGCCATGGAAGCTGAAGCAAAGGCCAACCACAGAAGTTAGAAAGCGCGTTTATGTTTGTCCAGAGCCTTCCTGCGTCCACCATAACCCAAGTCGAGCACTGGGTGATCTCACTGGCATCAAGAAGCACTTCTCAAGAAAACACGGCGAGAAGAAATGGAAATGTGAAAAATGCTCCAAGAGGTACGCTGTCCAGTCCGACTGGAAAGCCCATTCCAAGATCTGTGGTACTCGGGAATACAAATGCGACTGTGGCACCGTCTTCTCCAGAAGAGATAGCTTTATCACCCATAGAGCCTTCTGCGACGCGTTGGCCGAGGAGAAAAATAAAGCCAACAATGAAGGAGGACTACTAGGACCAAAATTATGGGGTCCAATAAATCCAAACTCATCACAAGGTCAATTTCAAATCCCAAATCCTGTTTCTTCATCATTGCCAATCAACTCCAACTTCAACCCAATGCAAAACGGGACGCCCCATTTTAACCATTCTTCTGAGGAAACGAAGCATCCACCACTGTCACACCTTCATCACCAGGAGCTTCTGGAATTTCCAGGGAAACAGTTCAACTACATGACTGGAAGCGTATTCGCAAGAAGCCTTTCGTCGAACGGTTCCTGTTCATCACTTCAACTGGGCTCAAATAGTTCCCTGAGCATGTTGGAAGAAAACGAGCACCAACCAGGTGGATCTGCCCACATGTCAGCCACGGCATTGTTGCAGAAAGCAGCTCAAATGGGAGCAACTATGAGCAACAGTACTAACAGCTCGTGCATGGCACCCTCGTCATTGGGGCCTCATAATACCACTAATAATAACAACCCCTACTTCACGAACAGTACTGGACAAGCTGATATGTCATCATCTCAGTATTTCCGCGGAAATAATAATAATAATAATAGCTTTGGGATGAACAGTGTGGATATGTTCAATGCTATAATGGACCAAAGCAAGGTGTTATCGAAGATGATACAACAGAAGAGTCCAGGCAGTAATAATATGAATAACAACGGAGTTTTGCATGGTAAAGGAAGTGGTGGGGATGTAACCACTCTAGACTTTTTGGGGATTGGAGGAGGTGGTGGTGCACATGATGCTTTTCTATGGCGCCAAGCAGGCTGA 1617 0.462 MTKKPYGRDTKMEVGDGCAVKTLGGWGSEIAGNLQHVNRRIFVASMSNITSCDSGGSFCTENSREDAAIKHHNPQLPAAHHHHQFHSPTSLTSTTTNSNGSNNANSQLPPPVKKKRSLPGNPDPSAEVIALSPNTLMARNRFVCEICSKGFQRDQNLQLHRRGHNLPWKLKQRPTTEVRKRVYVCPEPSCVHHNPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTREYKCDCGTVFSRRDSFITHRAFCDALAEEKNKANNEGGLLGPKLWGPINPNSSQGQFQIPNPVSSSLPINSNFNPMQNGTPHFNHSSEETKHPPLSHLHHQELLEFPGKQFNYMTGSVFARSLSSNGSCSSLQLGSNSSLSMLEENEHQPGGSAHMSATALLQKAAQMGATMSNSTNSSCMAPSSLGPHNTTNNNNPYFTNSTGQADMSSSQYFRGNNNNNNSFGMNSVDMFNAIMDQSKVLSKMIQQKSPGSNNMNNNGVLHGKGSGGDVTTLDFLGIGGGGGAHDAFLWRQAG 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2774 538 Gene3D Classic Zinc Finger 142 184 - -
Mibi06g2774 538 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 92 522 IPR031140 -
Mibi06g2774 538 ProSiteProfiles Zinc finger C2H2 type domain profile. 142 164 IPR013087 -
Mibi06g2774 538 MobiDBLite consensus disorder prediction 77 126 - -
Mibi06g2774 538 FunFam protein indeterminate-domain 5, chloroplastic-like 196 275 - -
Mibi06g2774 538 SUPERFAMILY beta-beta-alpha zinc fingers 141 238 IPR036236 -
Mibi06g2774 538 ProSitePatterns Zinc finger C2H2 type domain signature. 144 164 IPR013087 -
Mibi06g2774 538 Gene3D Classic Zinc Finger 195 277 - -
Mibi06g2774 538 MobiDBLite consensus disorder prediction 85 110 - -
Mibi06g2774 538 FunFam protein indeterminate-domain 12-like 121 189 - -
Mibi06g2774 538 Pfam Zinc finger, C2H2 type 142 164 IPR013087 -
Mibi06g2774 538 SMART c2h2final6 183 213 IPR013087 -
Mibi06g2774 538 SMART c2h2final6 142 164 IPR013087 -
Mibi06g2774 538 SMART c2h2final6 218 238 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2774 Mibi-ChrMibi06 47445726 47449623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2774 88 297 IDZ Gene Family AT5G66730 72.093 4.73e-107 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi06g2774 zf-C2H2 0.0094 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1667 02 16972226 16975555 Mibi06g2774 06 47445726 47449623 CCT
Mibi06g2774 06 47445726 47449623 Mibi06g2774 06 47445726 47449623 CCT
Mibi06g2774 06 47445726 47449623 Mibi06g2774 06 47445726 47449623 ECH