Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2772 ATGGATCCTGCTAGATCGACCTCGGGGAATGCCGATGATAGTGGGGGGATTCCAGATGACTTGCGATGCAAGAGGTCGGATGGGAAACAGTGGAGATGCACTGCTATGTCCATGCCAGATAAAACTGTCTGTGAGAAGCACTATATCCAGGCAAAGAAGAGGGCAGCCAATTCTGCCATGAGAGCTAGTCTGAAGAAGGCTAAGAGAAAGTCATTAGGTGAGAGTGACATTTATCTAGAGAGCAAGAGTGAGGATTTTGACATGCCACTTGCAAGCATGAAAGTTGAACTGCATTCGGGCTCTGGAAAGAACAAGGCATCAAAAAATCAATTCCGATATACAGCAGAGACACCAACCTCAAGGACCACTTCTGCACGCAATGCTCCGAAGCCAGATGATGATTCGCCAGATGATATTCCCCAGTATGAAGAAAATTGGATGTCTTATGAGTCACCGCCTGCTTCTCAAATGGACTTATCTAGGAAAAGATCTCAAACAAATTTAGATGCCAATGCTACTACAGAATACTCAGGTGGAAGTACAGATTCATCTGATGATTCAGGTGGGCAAATTTGCCATCAATGTCGAAGAAATGACAGAGACAGAGTTATCTGGTGCTTAAGATGTGATCGGAGAGGATACTGTGAGAGCTGTATATTGAAATGGTACCCAGACATGTCATTGGATGAAATTCAGAGGACCTGTCCTACCTGCCGTGGTACCTGTAATTGCAAAGTTTGCTTACGCAGTGATAATTCAATCAAGGTTCGGATTCGAGAGATACCTGTTCTAGACAAGTTACAATATCTTCACTTGCTGCTGTCATCGGTACTTCCTGTGGTAAAGCGGATCCATCACGAGCAGTGCTATGAAGTTGAACTCGAAAAGAAGTTGCGTGGGATTGAAATAGATCTCCCCAGGACAAAGCTGAATGCAGATGAGCAAATGTGCTGTAATTTCTGTCGGATACCCATTACTGATTATCACCGACACTGCCCAAATTGTACCTATGATTTATGCCTTAATTGCTGTCGAGATCTTCGAGAAGCAAATGTAAATCCAGAAGTAACCCCAACAGATGAAGCAAAGCTTTCAAATCAAAATTTGCTTTATAAATTGCCTGATTGGAGATCCAACAGTGATGATAGTATTCCATGTCCCCCGAAGAAATATGGTGGCTGTGGTTATTCACAATTGAATTTAAGTCGCATCTTCAAGATGAATTGGGTTGCAAAATTGGTGAAAAATGTGGAGGAGATGGTTAGTGGCTGCCAGATTAATGAAGTTGGAGGATCAGAAACCAAGTTGAATGATCTCAAACTTTGCCAATATTCTCACAGGGACGTGAGTGATGATAATTATCTGTACTGTCCACCATCTGAAGATCTCAAAACTGATGGGATAGGAAATTTTAGAAAGCACTGGAAAAATGGCGAACCTATTATTGTCAAGCAATTATTTGATAGGTCGCCGAGCTGGGATCCAATGGCCATATGGAGAGGGGTTCGGGAGACAGCAGATGAGAAAATGAAAGAAGTTGAGAACAGAGTGGTTAAGGCCATGGATTGTTTAACCTGGTCAGAGATAGATATCGAACTGAATGAATTCATGAAAGGATACTTTGAGGGGCGTACCCATGAGAATGGATTGCCACAATTATTGACGTTGAAGGACTGGCCTTCTCCTAGTGCTTCTGAAGAATTTTTATTGCATCAAAGACCTGAATTTATCAGCAAATTGCCTTTACTTGAATATATTCACTCGAAATGGGGCCTTCTTAACGTTGCAGCCAAATTGCCTCATTACTCCTTACAGAACGATGTAGGACCCAAGATTTATATTTCATATGGGGTCAATGAGGAACTTGGTAGTGGTGACTCAGTGACTAATCTCCACTTCAATATGCGTGACATGGTCTATCTTTTAGTCCATACAAGTGAAGTGAAGCTGAAGAGCTTGCAGGGAACAAAAAGTGAAAAGATACAAAAATCAACTGACAATAATGATTTGCTTGCGGATCCAAAAATGTGTTCAGTGGGGAGTCCAGCTGATTCATCAATTGGCACAGCAAGAAACGAAATAGATTTGGATTCAAATGAGAAAACATCAATTATCAATGAAGGGTTTGAAAATTATTCAAGTGCTGAAGGGGTAATTATCAATTCTGAACTTCCAGTCAAGGATGGAGATGTTGGGGAAAAAACGGATCCTGGAGTTCTTTGGGATGTCTTCCGTCGGCAGGATGTTCCAAAGCTGACTGAATTTCTAAAAATACATTGGAAAGAATTCATGCAGCCGGATGATATGGTTACAAGGCTTCTTTATGATGGAGTTATTTTTCTTAATAGACACCATAAAAGGGAGTTGAAGGAAGAATTTGGAGTGGAGCCATGGTCATTTGAACAGTGCGTGGGGGAAGCTGTATTTGTACCTGCAGGGTGCCCTTTCCAAGCAAGGAATGTTCTGTCCAATGTTCAGCTGGGCCTTGATTTCTTATCACCGGAGAGCCTAGGAGAGGCAGTGAGATTGGCCGAGGACGTCCGCTGTCTGCCAAATGAACATGAAGCCAAGCATCAAGTATTGGAGGTTGGGAAGATATCTCTTTATGCCGCAAGCTCAGCCATCAAAGAAGTTCAAAAACTTGTTCTCGACCCAAAACTTGGTGCAGAGATTGGATTTGGGGATCCCAATCTGACTGCAATGGTTGCTGAGAACTACGAGAAGATGGTGAAGCGAAGACAGATTTCTTGTGCTTGA 2757 0.4244 MDPARSTSGNADDSGGIPDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSAMRASLKKAKRKSLGESDIYLESKSEDFDMPLASMKVELHSGSGKNKASKNQFRYTAETPTSRTTSARNAPKPDDDSPDDIPQYEENWMSYESPPASQMDLSRKRSQTNLDANATTEYSGGSTDSSDDSGGQICHQCRRNDRDRVIWCLRCDRRGYCESCILKWYPDMSLDEIQRTCPTCRGTCNCKVCLRSDNSIKVRIREIPVLDKLQYLHLLLSSVLPVVKRIHHEQCYEVELEKKLRGIEIDLPRTKLNADEQMCCNFCRIPITDYHRHCPNCTYDLCLNCCRDLREANVNPEVTPTDEAKLSNQNLLYKLPDWRSNSDDSIPCPPKKYGGCGYSQLNLSRIFKMNWVAKLVKNVEEMVSGCQINEVGGSETKLNDLKLCQYSHRDVSDDNYLYCPPSEDLKTDGIGNFRKHWKNGEPIIVKQLFDRSPSWDPMAIWRGVRETADEKMKEVENRVVKAMDCLTWSEIDIELNEFMKGYFEGRTHENGLPQLLTLKDWPSPSASEEFLLHQRPEFISKLPLLEYIHSKWGLLNVAAKLPHYSLQNDVGPKIYISYGVNEELGSGDSVTNLHFNMRDMVYLLVHTSEVKLKSLQGTKSEKIQKSTDNNDLLADPKMCSVGSPADSSIGTARNEIDLDSNEKTSIINEGFENYSSAEGVIINSELPVKDGDVGEKTDPGVLWDVFRRQDVPKLTEFLKIHWKEFMQPDDMVTRLLYDGVIFLNRHHKRELKEEFGVEPWSFEQCVGEAVFVPAGCPFQARNVLSNVQLGLDFLSPESLGEAVRLAEDVRCLPNEHEAKHQVLEVGKISLYAASSAIKEVQKLVLDPKLGAEIGFGDPNLTAMVAENYEKMVKRRQISCA 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2772 918 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 19 882 IPR045109 GO:0032454|GO:0033169
Mibi06g2772 918 SMART cupin_9 569 848 IPR003347 -
Mibi06g2772 918 MobiDBLite consensus disorder prediction 67 85 - -
Mibi06g2772 918 Pfam WRC 18 58 IPR014977 -
Mibi06g2772 918 MobiDBLite consensus disorder prediction 97 143 - -
Mibi06g2772 918 Gene3D Cupin 452 857 - -
Mibi06g2772 918 Pfam JmjC domain, hydroxylase 739 827 IPR003347 -
Mibi06g2772 918 ProSiteProfiles WRC domain profile. 17 61 IPR014977 -
Mibi06g2772 918 ProSiteProfiles JmjC domain profile. 562 848 IPR003347 -
Mibi06g2772 918 MobiDBLite consensus disorder prediction 55 85 - -
Mibi06g2772 918 MobiDBLite consensus disorder prediction 170 190 - -
Mibi06g2772 918 ProSiteProfiles Zinc finger RING-type profile. 192 239 IPR001841 -
Mibi06g2772 918 SUPERFAMILY Clavaminate synthase-like 472 857 - -
Mibi06g2772 918 MobiDBLite consensus disorder prediction 1 24 - -
Mibi06g2772 918 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 186 252 IPR018866 -
Mibi06g2772 918 MobiDBLite consensus disorder prediction 102 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2772 Mibi-ChrMibi06 47438196 47443407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2772 18 58 GRF Transcription Factor Family AT3G13960 46.341 2.39e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mibi06g2772 JmjC 2.5e-06 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2772 06 47438196 47443407 Mibi06g2772 06 47438196 47443407 ECH